RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 HERC4Q5GLZ8 1057 aaPredicted RBP20.5■□□□□ 0.87
CASC4-209ENST00000559222 ZPBP2Q6X784 338 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 TMEM130Q8N3G9 435 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 POF1BQ8WVV4 589 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 MRPS27Q92552 414 aaKnown RBP20.5■□□□□ 0.87
CASC4-209ENST00000559222 RABGGTAQ92696 567 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 MRPL38Q96DV4 380 aaKnown RBP20.5■□□□□ 0.87
CASC4-209ENST00000559222 BICD1Q96G01 975 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 PAGE5Q96GU1 130 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 ST6GALNAC4Q9H4F1 302 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 MRPL44Q9H9J2 332 aaKnown RBP20.5■□□□□ 0.87
CASC4-209ENST00000559222 PCDHB12Q9Y5F1 795 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 UNC80Q8N2C7 3258 aa20.5■□□□□ 0.87
CASC4-209ENST00000559222 H0YCG3 227 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 GTPBP6O43824 516 aaPredicted RBP20.49■□□□□ 0.87
CASC4-209ENST00000559222 TOM1L1O75674 476 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 GCNT3O95395 438 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 PIGRP01833 764 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 GALTP07902 379 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 SLFN14P0C7P3 912 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 MCF2P10911 925 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 GRM5P41594 1212 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 SYKP43405 635 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 DSC1Q08554 894 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 NOLC1Q14978 699 aaKnown RBP eCLIP20.49■□□□□ 0.87
CASC4-209ENST00000559222 GLRA4Q5JXX5 417 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 CNNM4Q6P4Q7 775 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 VN1R3Q9BXE9 311 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 MAGEF1Q9HAY2 307 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 UBN1Q9NPG3 1134 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 OLFML3Q9NRN5 406 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 SEL1LQ9UBV2 794 aa20.49■□□□□ 0.87
CASC4-209ENST00000559222 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
CASC4-209ENST00000559222 KLRC4O43908 158 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 TNFSF9P41273 254 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 LIG4P49917 911 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 ERVFC1P60507 584 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 MCL1Q07820 350 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 EHHADHQ08426 723 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 NAB2Q15742 525 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 CCDC65Q8IXS2 484 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 COLGALT2Q8IYK4 626 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 HACE1Q8IYU2 909 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 CEP57L1Q8IYX8 460 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 PAAF1Q9BRP4 392 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 TCHPQ9BT92 498 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 MARCH5Q9NX47 278 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 KCNG1Q9UIX4 513 aa20.48■□□□□ 0.87
CASC4-209ENST00000559222 ZMYM2Q9UBW7 1377 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 PRUNE2Q8WUY3 3088 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 FAM189A1O60320 539 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 GADD45BO75293 160 aaPredicted RBP20.47■□□□□ 0.87
CASC4-209ENST00000559222 PRPF6O94906 941 aaKnown RBP20.47■□□□□ 0.87
CASC4-209ENST00000559222 TCEAL5Q5H9L2 206 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
CASC4-209ENST00000559222 ADGRD2Q7Z7M1 963 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 ZSWIM2Q8NEG5 633 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 RPS6KC1Q96S38 1066 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 SPG21Q9NZD8 308 aa20.47■□□□□ 0.87
CASC4-209ENST00000559222 PRG3Q9Y2Y8 225 aaPredicted RBP20.47■□□□□ 0.87
CASC4-209ENST00000559222 NRP1O14786 923 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 IGFBP6P24592 240 aaPredicted RBP20.46■□□□□ 0.87
CASC4-209ENST00000559222 GTF2F1P35269 517 aaKnown RBP eCLIP20.46■□□□□ 0.87
CASC4-209ENST00000559222 HOXD13P35453 343 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 MATR3P43243 847 aaKnown RBP eCLIP20.46■□□□□ 0.87
CASC4-209ENST00000559222 AMPD3Q01432 767 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 GRIK3Q13003 919 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 UNC13DQ70J99 1090 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 SNX27Q96L92 541 aa20.46■□□□□ 0.87
CASC4-209ENST00000559222 ZMAT2Q96NC0 199 aaKnown RBP20.46■□□□□ 0.87
CASC4-209ENST00000559222 CLDN3O15551 220 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 ZNF202O95125 648 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 CXCL8P10145 99 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 ADSSP30520 456 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 OR1G1P47890 313 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 ALDH7A1P49419 539 aaKnown RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 PLCB3Q01970 1234 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 SOX4Q06945 474 aaPredicted RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 FAM26FQ5R3K3 315 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 ALKAL1Q6UXT8 129 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 KRBA2Q6ZNG9 492 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 HVCN1Q96D96 273 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 IGSF21Q96ID5 467 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 FAM193BQ96PV7 902 aaPredicted RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 PPP1R10Q96QC0 940 aaKnown RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 PYM1Q9BRP8 204 aaKnown RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 CCDC94Q9BW85 323 aaPredicted RBP20.45■□□□□ 0.86
CASC4-209ENST00000559222 LRRC27Q9C0I9 530 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 GOLGA2P5Q9HBQ8 144 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 LMCD1Q9NZU5 365 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 KANSL3Q9P2N6 904 aa20.45■□□□□ 0.86
CASC4-209ENST00000559222 A0A0B4J269 797 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 CASTOR2A6NHX0 329 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 FSCN2O14926 492 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 SPAG1Q07617 926 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 PTPROQ16827 1216 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 SLC10A6Q3KNW5 377 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms