RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 RTKN2Q8IZC4 609 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MSL3Q8N5Y2 521 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF527Q8NB42 609 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PCSK9Q8NBP7 692 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 FBXO18Q8NFZ0 1043 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PLBD2Q8NHP8 589 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 BRIX1Q8TDN6 353 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 NSUN6Q8TEA1 469 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF480Q8WV37 535 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 TNPO1Q92973 898 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 FAM167AQ96KS9 214 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PDCD2LQ9BRP1 358 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 FDXACB1Q9BRP7 624 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 C22orf23Q9BZE7 217 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 WDR12Q9GZL7 423 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MYLK2Q9H1R3 596 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 EPB41L4AQ9HCS5 686 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SLAMF7Q9NQ25 335 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SACM1LQ9NTJ5 587 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MBNL3Q9NUK0 354 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PNPOQ9NVS9 261 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 C19orf73Q9NVV2 129 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SPATA6Q9NWH7 488 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 KLHL14Q9P2G3 628 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 ANAPC4Q9UJX5 808 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 FAM184BQ9ULE4 1060 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 RUVBL1Q9Y265 456 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PCDHA1Q9Y5I3 950 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SLC4A7Q9Y6M7 1214 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 DGKBQ9Y6T7 804 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MYBBP1AQ9BQG0 1328 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 A0A087WV62 115 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 A0A0A6YYK5 440 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 A0A0G2JNJ9 132 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 KLRG2A4D1S0 409 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ISM1B1AKI9 464 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 H0Y858 1186 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 APOL1O14791 398 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ADAMTS3O15072 1205 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 FRS3O43559 492 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SGTAO43765 313 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SEC24DO94855 1032 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 IL18RAPO95256 599 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 MED26O95402 600 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 LY86O95711 162 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 WNT11O96014 354 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 C8BP07358 591 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 HARSP12081 509 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 NCAM1P13591 858 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TYRP14679 529 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TYRP1P17643 537 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PTPN7P35236 360 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 MC3RP41968 323 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 GRK6P43250 576 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 MEOX1P50221 254 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 STAT5BP51692 787 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CASP5P51878 434 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 NCKAP1LP55160 1127 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SUMO3P55854 103 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ANTXR2P58335 489 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CREMQ03060 361 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ICA1Q05084 483 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF543Q08ER8 600 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PMS2P11Q13670 270 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 BLMHQ13867 455 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 RAB39AQ14964 217 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 UBE3CQ15386 1083 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TARBP2Q15633 366 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ATP2B3Q16720 1220 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF792Q3KQV3 632 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ARL13BQ3SXY8 428 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 FLYWCH1Q4VC44 716 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 DGKKQ5KSL6 1271 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 KLHDC7AQ5VTJ3 777 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 KANK2Q63ZY3 851 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SPTY2D1Q68D10 685 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 KRT40Q6A162 431 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TMEM132EQ6IEE7 984 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 MPZL3Q6UWV2 235 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ABHD15Q6UXT9 468 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CXXC5Q7LFL8 322 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF605Q86T29 641 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PROSER1Q86XN7 944 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 DTX1Q86Y01 620 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TXLNBQ8N3L3 684 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 DTX3Q8N9I9 347 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TEX19Q8NA77 164 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 IL31RAQ8NI17 732 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SMARCC2Q8TAQ2 1214 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 STON2Q8WXE9 905 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 GCDHQ92947 438 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CYFIP2Q96F07 1278 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SUCLG2Q96I99 432 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 WRNIP1Q96S55 665 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SOX7Q9BT81 388 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PAGR1Q9BTK6 254 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 UNKQ9C0B0 810 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 MAF1Q9H063 256 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 ZHX3Q9H4I2 956 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms