RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 CLUHO75153 1309 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 VPS13AQ96RL7 3174 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
SEMA4B-205ENST00000558848 H0Y858 1186 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 ST18O60284 1047 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 AOC1P19801 751 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 NBL1P41271 181 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 TRAPPC10P48553 1259 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 FOSBP53539 338 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 CREMQ03060 361 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 ELMSAN1Q6PJG2 1045 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 ZBTB8OSQ8IWT0 167 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 PIK3R5Q8WYR1 880 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 NXPE3Q969Y0 559 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 CCDC43Q96MW1 224 aaKnown RBP13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 MYADMQ96S97 322 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 PRKD2Q9BZL6 878 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 FAM86C1Q9NVL1 165 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 PARP2Q9UGN5 583 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 SF3B1O75533 1304 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
SEMA4B-205ENST00000558848 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 N4BP3O15049 544 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 PI15O43692 258 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 ZMYND10O75800 440 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 RECQL4O94761 1208 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 KIF4AO95239 1232 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 PDIA5Q14554 519 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 ZNF174Q15697 407 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 MAPK6Q16659 721 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 PALB2Q86YC2 1186 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 CCDC83Q8IWF9 413 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 ERMNQ8TAM6 284 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 STAMQ92783 540 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 ATOH1Q92858 354 aaPredicted RBP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 WNT16Q9UBV4 365 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
SEMA4B-205ENST00000558848 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
SEMA4B-205ENST00000558848 ARHGEF35A5YM69 484 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 TADA2AO75478 443 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 PRKCBP05771 671 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 THP07101 528 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 POU2F2P09086 479 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 LAMP2P13473 410 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 RPL17P18621 184 aaKnown RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 RBM25P49756 843 aaKnown RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 TOB1P50616 345 aaPredicted RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 EFNA5P52803 228 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 HMGN5P82970 282 aaKnown RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 PPP2R5AQ15172 486 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 NT5DC1Q5TFE4 455 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 RSAD2Q8WXG1 361 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 TTPALQ9BTX7 342 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 USP20Q9Y2K6 914 aa13.02□□□□□ -0.33
SEMA4B-205ENST00000558848 KRBA1A5PL33 1030 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 CASTOR2A6NHX0 329 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 NARSO43776 548 aaKnown RBP13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 GFRA3O60609 400 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 FGFR3P22607 806 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 HOXA9P31269 272 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 DAW1Q8N136 415 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
SEMA4B-205ENST00000558848 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms