RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 HAPLN2Q9GZV7 340 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 TMEM117Q9H0C3 514 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 IKZF4Q9H2S9 585 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 PLEKHA5Q9HAU0 1116 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 TOPORSQ9NS56 1045 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 SNTG2Q9NY99 539 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 PARP2Q9UGN5 583 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
LRRC28-204ENST00000558172 HES2Q9Y543 173 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 MYO9BQ13459 2157 aa11.42□□□□□ -0.58
LRRC28-204ENST00000558172 BICDL2A1A5D9 508 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 TISP43B9A030 160 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 CLIC2O15247 247 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 INPPL1O15357 1258 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 TLL1O43897 1013 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 EXTL3O43909 919 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 FAM189A1O60320 539 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 OFD1O75665 1012 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 AKAP5P24588 427 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 OSTNP61366 133 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 RAB30Q15771 203 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 LRIT3Q3SXY7 679 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 FAM117BQ6P1L5 589 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 CMTR2Q8IYT2 770 aaKnown RBP11.41□□□□□ -0.58
LRRC28-204ENST00000558172 CEP120Q8N960 986 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 URGCPQ8TCY9 931 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 LPPQ93052 612 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 P2RX5Q93086 422 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 TSPAN18Q96SJ8 248 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 CBWD1Q9BRT8 395 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 APOL6Q9BWW8 343 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 MRPL9Q9BYD2 267 aaKnown RBP11.41□□□□□ -0.58
LRRC28-204ENST00000558172 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 SEMA6BQ9H3T3 888 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 PCIF1Q9H4Z3 704 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 RPF1Q9H9Y2 349 aaKnown RBP11.41□□□□□ -0.58
LRRC28-204ENST00000558172 ANO10Q9NW15 660 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 DMAC2Q9NW81 257 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 CPSF3Q9UKF6 684 aaKnown RBP11.41□□□□□ -0.58
LRRC28-204ENST00000558172 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
LRRC28-204ENST00000558172 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.41□□□□□ -0.58
LRRC28-204ENST00000558172 COL4A6Q14031 1691 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 KIAA1671Q9BY89 1806 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 CARNS1A5YM72 827 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ZNF233A6NK53 670 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 EXOC3O60645 756 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RECQL4O94761 1208 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 NR3C1P04150 777 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ADRB2P07550 413 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 FGFR1P11362 822 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 SMAD3P84022 425 aaKnown RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 PAK1Q13153 545 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ADAM9Q13443 819 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 SURF1Q15526 300 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 STX1AQ16623 288 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ZCWPW2Q504Y3 356 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 NOMO2Q5JPE7 1267 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 CLLU1OSQ5K130 101 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 FBXL18Q96ME1 805 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 CASD1Q96PB1 797 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RPS6KC1Q96S38 1066 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ASB7Q9H672 318 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RC3H2Q9HBD1 1191 aaKnown RBP11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RNF19AQ9NV58 838 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 RWDD2AQ9UIY3 292 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 FRMD4BQ9Y2L6 1034 aa11.4□□□□□ -0.58
LRRC28-204ENST00000558172 ARL5CA6NH57 179 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 TBKBP1A7MCY6 615 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 CETN3O15182 167 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 MAPK13O15264 365 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 IL18RAPO95256 599 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
LRRC28-204ENST00000558172 NR2F2P24468 414 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 MLH1P40692 756 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 TNFSF9P41273 254 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 ACOT2P49753 483 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 CYP2J2P51589 502 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 PPP2R3AQ06190 1150 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 BTG3Q14201 252 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-204ENST00000558172 SLC10A6Q3KNW5 377 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 ANKRD40Q6AI12 368 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 KLHL10Q6JEL2 608 aa11.39□□□□□ -0.59
LRRC28-204ENST00000558172 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms