RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 MAGEF1Q9HAY2 307 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.22
SLIRP-211ENST00000557623 PDCD11Q14690 1871 aaKnown RBP13.7□□□□□ -0.22
SLIRP-211ENST00000557623 MYMKA6NI61 221 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 POMCP01189 267 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 ALDH2P05091 517 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 AKAP5P24588 427 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 MLH1P40692 756 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 BMS1Q14692 1282 aaKnown RBP13.7□□□□□ -0.22
SLIRP-211ENST00000557623 E2F4Q16254 413 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 EEF1DP3Q658K8 133 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 SLC39A11Q8N1S5 342 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 DHX58Q96C10 678 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 TARS2Q9BW92 718 aaKnown RBP13.7□□□□□ -0.22
SLIRP-211ENST00000557623 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 STK39Q9UEW8 545 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 USP20Q9Y2K6 914 aa13.7□□□□□ -0.22
SLIRP-211ENST00000557623 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
SLIRP-211ENST00000557623 NCK2O43639 380 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 NR1I2O75469 434 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 TOM1L1O75674 476 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 GALTP07902 379 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 MCF2P10911 925 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 PROZP22891 400 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 SCNN1GP51170 649 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 GTF2BQ00403 316 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLIRP-211ENST00000557623 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 BICD1Q96G01 975 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-211ENST00000557623 CDT1Q9H211 546 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 COG5Q9UP83 839 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
SLIRP-211ENST00000557623 CLDN3O15551 220 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 RECQL4O94761 1208 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 DDHD2O94830 711 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 IDEP14735 1019 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 CMA1P23946 247 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 DNAJB1P25685 340 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 PBX3P40426 434 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 GRM5P41594 1212 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 LIG4P49917 911 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 AFF1P51825 1210 aaKnown RBP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 YARSP54577 528 aaKnown RBP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 CAMK1Q14012 370 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 SFR1Q86XK3 245 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 ZNF280BQ86YH2 543 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 CCDC65Q8IXS2 484 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 MICAL1Q8TDZ2 1067 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 HVCN1Q96D96 273 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 IGSF21Q96ID5 467 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 MRPL44Q9H9J2 332 aaKnown RBP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-211ENST00000557623 PANK4Q9NVE7 773 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 KCNH3Q9ULD8 1083 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 GDAQ9Y2T3 454 aa13.68□□□□□ -0.22
SLIRP-211ENST00000557623 TRANK1O15050 2925 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 FRMD3A2A2Y4 597 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 PIGRP01833 764 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 THP07101 528 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 SLC11A1P49279 550 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 DSC1Q08554 894 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ALCAMQ13740 583 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 KYAT1Q16773 422 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 AAK1Q2M2I8 961 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
SLIRP-211ENST00000557623 HLA-CQ95604 372 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms