RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 PDCP20941 246 aa24.94■■□□□ 1.58
TMEM260-214ENST00000556975 DSG1Q02413 1049 aa24.94■■□□□ 1.58
TMEM260-214ENST00000556975 ZRSR1Q15695 479 aaKnown RBP24.94■■□□□ 1.58
TMEM260-214ENST00000556975 TMEM119Q4V9L6 283 aa24.94■■□□□ 1.58
TMEM260-214ENST00000556975 APBB1IPQ7Z5R6 666 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-214ENST00000556975 KMT5AQ9NQR1 393 aa24.94■■□□□ 1.58
TMEM260-214ENST00000556975 ADAM28Q9UKQ2 775 aa24.94■■□□□ 1.58
TMEM260-214ENST00000556975 THP07101 528 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 MTHFRP42898 656 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 GLUD2P49448 558 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 SLC12A3P55017 1021 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 NAB2Q15742 525 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 FUT10Q6P4F1 479 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 RIPOR3Q96MK2 946 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 ACO2Q99798 780 aaKnown RBP24.93■■□□□ 1.58
TMEM260-214ENST00000556975 GPR62Q9BZJ7 368 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 PTPRHQ9HD43 1115 aa24.93■■□□□ 1.58
TMEM260-214ENST00000556975 C1RP00736 705 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 KIAA1841Q6NSI8 718 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 TAS1R3Q7RTX0 852 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 CABP7Q86V35 215 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 C12orf76Q8N812 135 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-214ENST00000556975 SPIRE2Q8WWL2 714 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 EDAQ92838 391 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 CDK5RAP3Q96JB5 506 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 FBXL18Q96ME1 805 aa24.92■■□□□ 1.58
TMEM260-214ENST00000556975 ARIH1Q9Y4X5 557 aaPredicted RBP24.92■■□□□ 1.58
TMEM260-214ENST00000556975 C2CD2LO14523 706 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 TADA2AO75478 443 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 ADH1AP07327 375 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 PLA2G4BP0C869 781 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 HSP90AA2PQ14568 343 aaPredicted RBP24.91■■□□□ 1.58
TMEM260-214ENST00000556975 USP41Q3LFD5 358 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 ATAT1Q5SQI0 421 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 RARS2Q5T160 578 aaKnown RBP24.91■■□□□ 1.58
TMEM260-214ENST00000556975 INTS4Q96HW7 963 aaKnown RBP24.91■■□□□ 1.58
TMEM260-214ENST00000556975 PLIN2Q99541 437 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 PAAF1Q9BRP4 392 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 MRPL4Q9BYD3 311 aaKnown RBP24.91■■□□□ 1.58
TMEM260-214ENST00000556975 CXCL16Q9H2A7 254 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 POMKQ9H5K3 350 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 SFXN1Q9H9B4 322 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 CDH22Q9UJ99 828 aa24.91■■□□□ 1.58
TMEM260-214ENST00000556975 TRIOO75962 3097 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 SFI1A8K8P3 1242 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 TEX28O15482 410 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 PLS3P13797 630 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 LONP1P36776 959 aaKnown RBP24.9■■□□□ 1.58
TMEM260-214ENST00000556975 UBA7P41226 1012 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 SF3A1Q15459 793 aaKnown RBP24.9■■□□□ 1.58
TMEM260-214ENST00000556975 CALML4Q96GE6 196 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.9■■□□□ 1.58
TMEM260-214ENST00000556975 FNIP2Q9P278 1114 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 GDAQ9Y2T3 454 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 NR2E1Q9Y466 385 aa24.9■■□□□ 1.58
TMEM260-214ENST00000556975 VPS37CA5D8V6 355 aaPredicted RBP24.89■■□□□ 1.58
TMEM260-214ENST00000556975 PROZP22891 400 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 GRM5P41594 1212 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 ARSHQ5FYA8 562 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 KANK3Q6NY19 840 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 GPR149Q86SP6 731 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 RABGGTAQ92696 567 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 KCNN1Q92952 543 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 TARS2Q9BW92 718 aaKnown RBP24.89■■□□□ 1.58
TMEM260-214ENST00000556975 CDT1Q9H211 546 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 DPP7Q9UHL4 492 aa24.89■■□□□ 1.58
TMEM260-214ENST00000556975 SF3B1O75533 1304 aaKnown RBP eCLIP24.88■■□□□ 1.57
TMEM260-214ENST00000556975 MYH11P35749 1972 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 CASTOR2A6NHX0 329 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 ABLIM1O14639 778 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 SLC16A4O15374 487 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 BRD1O95696 1058 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 HOXD11P31277 338 aaPredicted RBP24.88■■□□□ 1.57
TMEM260-214ENST00000556975 SMTNP53814 917 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 XKR4Q5GH76 650 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 ALKAL1Q6UXT8 129 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 TMEM161BQ8NDZ6 487 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 CMASQ8NFW8 434 aaPredicted RBP24.88■■□□□ 1.57
TMEM260-214ENST00000556975 PPP1R10Q96QC0 940 aaKnown RBP24.88■■□□□ 1.57
TMEM260-214ENST00000556975 CACNG4Q9UBN1 327 aa24.88■■□□□ 1.57
TMEM260-214ENST00000556975 MCF2P10911 925 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 SYT1P21579 422 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 ZXDAP98168 799 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 CREMQ03060 361 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 GRIN1Q05586 938 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 RAD51AP2Q09MP3 1159 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 TMC5Q6UXY8 1006 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 C15orf39Q6ZRI6 1047 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 HDAC7Q8WUI4 952 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 CCDC94Q9BW85 323 aaPredicted RBP24.87■■□□□ 1.57
TMEM260-214ENST00000556975 RHOBTB2Q9BYZ6 727 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 LARSQ9P2J5 1176 aaKnown RBP24.87■■□□□ 1.57
TMEM260-214ENST00000556975 USTQ9Y2C2 406 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 TRIP11Q15643 1979 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 TECTAO75443 2155 aa24.87■■□□□ 1.57
TMEM260-214ENST00000556975 KIF4AO95239 1232 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 PAPLNO95428 1278 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 GLUD1P00367 558 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 WEE2P0C1S8 567 aa24.86■■□□□ 1.57
TMEM260-214ENST00000556975 MAPTP10636 758 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms