RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 GLT8D2Q9H1C3 349 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 ARHGEF3Q9NR81 526 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 MRPL17Q9NRX2 175 aaKnown RBP14.15□□□□□ -0.14
PSEN1-219ENST00000556951 SEMA4GQ9NTN9 838 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 MARCH5Q9NX47 278 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 FAN1Q9Y2M0 1017 aa14.15□□□□□ -0.14
PSEN1-219ENST00000556951 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 WDR64B1ANS9 1081 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 C2CD2LO14523 706 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SKIP12755 728 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 PFKFB3Q16875 520 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 UBXN11Q5T124 520 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 LILRA6Q6PI73 481 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 KSR1Q8IVT5 923 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SMG7Q92540 1137 aaKnown RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 GJA10Q969M2 543 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SH2D3AQ9BRG2 576 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 DDX23Q9BUQ8 820 aaKnown RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 HERC2P3Q9BVR0 1158 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 ZMYND12Q9H0C1 365 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SPATA6Q9NWH7 488 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 PIN4Q9Y237 131 aaKnown RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-219ENST00000556951 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
PSEN1-219ENST00000556951 ESYT2A0FGR8 921 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 MSH4O15457 936 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 RAB27AP51159 221 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 GPC5P78333 572 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 KRT85P78386 507 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 SETQ01105 290 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 CSRP2Q16527 193 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 LAIR1Q6GTX8 287 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 B3GNT9Q6UX72 402 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 STAMQ92783 540 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-219ENST00000556951 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 GJB4Q9NTQ9 266 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 MIOSQ9NXC5 875 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 STK39Q9UEW8 545 aa14.13□□□□□ -0.15
PSEN1-219ENST00000556951 DOCK6Q96HP0 2047 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 F8W810 466 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 MAFO75444 373 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 POMCP01189 267 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 RETP07949 1114 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 MTERF2Q49AM1 385 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 ZNF410Q86VK4 478 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 COLGALT2Q8IYK4 626 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 GATA6Q92908 595 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 SLC5A5Q92911 643 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 RIT2Q99578 217 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 INO80BQ9C086 356 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 SCAND2PQ9GZW5 306 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 MINDY3Q9H8M7 445 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 RSAD1Q9HA92 442 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 CHST7Q9NS84 486 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 LMBRD1Q9NUN5 540 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 SUCLA2Q9P2R7 463 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-219ENST00000556951 CFAP45Q9UL16 551 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 WASF3Q9UPY6 502 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 NUMBLQ9Y6R0 609 aa14.12□□□□□ -0.15
PSEN1-219ENST00000556951 GAS2O43903 313 aaKnown RBP14.11□□□□□ -0.15
PSEN1-219ENST00000556951 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
PSEN1-219ENST00000556951 PSMD10O75832 226 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 GLUD1P00367 558 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 C1RP00736 705 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 ADH1AP07327 375 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
PSEN1-219ENST00000556951 LIMK1P53667 647 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 DSG1Q02413 1049 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 GNL2Q13823 731 aaKnown RBP14.11□□□□□ -0.15
PSEN1-219ENST00000556951 XKR3Q5GH77 459 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 PARM1Q6UWI2 310 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 PDZD3Q86UT5 571 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
PSEN1-219ENST00000556951 RHPN2Q8IUC4 686 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms