RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 C4orf32Q8N8J7 132 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 SMRP1Q8NCR6 262 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 DRC1Q96MC2 740 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 RPS6KC1Q96S38 1066 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 APOL6Q9BWW8 343 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 NT5C3AQ9H0P0 336 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 GPRC5CQ9NQ84 441 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 MRPL17Q9NRX2 175 aaKnown RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 BARX2Q9UMQ3 279 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 TRIOO75962 3097 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 C2orf71A6NGG8 1288 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 CCDC169A6NNP5 214 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 MEIS3P2A8K0S8 358 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 HIDE1A8MVS5 230 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 K7ERI5 159 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 ACKR2O00590 384 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 FSCN2O14926 492 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 N4BP3O15049 544 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 UBA7P41226 1012 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 OR1G1P47890 313 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 TOB1P50616 345 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 SMTNP53814 917 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 ZP2Q05996 745 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 DMP1Q13316 513 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 FAM187BQ17R55 369 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 TMEM184AQ6ZMB5 413 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 BRAPQ7Z569 592 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 RASSF8Q8NHQ8 419 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 GAD1Q99259 594 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 COLEC11Q9BWP8 271 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 EIF2AQ9BY44 585 aaKnown RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 C17orf75Q9HAS0 396 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 CLEC1BQ9P126 229 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 NOVA2Q9UNW9 492 aaKnown RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 RBM19Q9Y4C8 960 aaKnown RBP8.08□□□□□ -1.12
SCFD1-222ENST00000556768 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 IRAK3Q9Y616 596 aa8.08□□□□□ -1.12
SCFD1-222ENST00000556768 VWA3AA6NCI4 1184 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 PI4K2BG5E9Z4 385 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 NRP1O14786 923 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 DCXO43602 365 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 NPTXRO95502 500 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 SSBP05455 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCFD1-222ENST00000556768 PRKCBP05771 671 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 URODP06132 367 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 CTSAP10619 480 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 KLRC2P26717 231 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 MLH1P40692 756 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 SLC11A1P49279 550 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 ITIH3Q06033 890 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 UBXN11Q5T124 520 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 CDCA2Q69YH5 1023 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-222ENST00000556768 ZNF280BQ86YH2 543 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 SMG8Q8ND04 991 aaKnown RBP8.07□□□□□ -1.12
SCFD1-222ENST00000556768 CALML4Q96GE6 196 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 AK8Q96MA6 479 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 TIPINQ9BVW5 301 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 FZD8Q9H461 694 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SCFD1-222ENST00000556768 DNAJB4Q9UDY4 337 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 HES2Q9Y543 173 aa8.07□□□□□ -1.12
SCFD1-222ENST00000556768 MYH9P35579 1960 aaKnown RBP8.07□□□□□ -1.12
SCFD1-222ENST00000556768 B4GALT5O43286 388 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 TADA2AO75478 443 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 DDHD2O94830 711 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 AKAP5P24588 427 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CDC25AP30304 524 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 SCNN1GP51170 649 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ATP2C1P98194 919 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CBX2Q14781 532 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 DCAF4L1Q3SXM0 396 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ATAT1Q5SQI0 421 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ANKRD54Q6NXT1 300 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CABP7Q86V35 215 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 TCHPQ9BT92 498 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 PHF7Q9BWX1 381 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ZBP1Q9H171 429 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 NXF3Q9H4D5 531 aaKnown RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 EPHX3Q9H6B9 360 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 KMT5AQ9NQR1 393 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 DZANK1Q9NVP4 752 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 KCND2Q9NZV8 630 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 PRG3Q9Y2Y8 225 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 NR2E1Q9Y466 385 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 HCFC2Q9Y5Z7 792 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 BRWD1Q9NSI6 2320 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 MYO7AQ13402 2215 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 VPS37CA5D8V6 355 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms