RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 GNA14O95837 355 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 TSPY3P0CV98 308 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 TSPY8P0CW00 308 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 RXRAP19793 462 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 ATP2B1P20020 1258 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 GARTP22102 1010 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 BUD31P41223 144 aaPredicted RBP6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CDK8P49336 464 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CACNB3P54284 484 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 MESP2Q0VG99 397 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CUL4BQ13620 913 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 SEPT6Q14141 434 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 KCNJ12Q14500 433 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 TCP11X2Q5H9J9 407 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 ISM2Q6H9L7 571 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CTR9Q6PD62 1173 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 FBXO38Q6PIJ6 1188 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 LEKR1Q6ZMV7 388 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 MIGA1Q8NAN2 632 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 GATAD2BQ8WXI9 593 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 EXOC4Q96A65 974 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 ELMO3Q96BJ8 720 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 NSUN4Q96CB9 384 aaKnown RBP6.75□□□□□ -1.33
CPSF2-205ENST00000556622 RRP36Q96EU6 259 aaKnown RBP6.75□□□□□ -1.33
CPSF2-205ENST00000556622 ALS2CR12Q96Q35 445 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 TSG101Q99816 390 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 DUSP23Q9BVJ7 150 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CARD6Q9BX69 1037 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 VIPAS39Q9H9C1 493 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 SLC5A6Q9Y289 635 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 CSADQ9Y600 493 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 ESYT2A0FGR8 921 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 USP2O75604 605 aaPredicted RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 RHOBTB3O94955 611 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 ZRANB2O95218 330 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 PF4P02776 101 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 PNMA6AP0CW24 399 aaPredicted RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 PRLRP16471 622 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 AFMP43652 599 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 MECOMQ03112 1051 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 UBXN1Q04323 297 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 ITIH3Q06033 890 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 TCP10Q12799 353 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 KIF5AQ12840 1032 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 BNIP3Q12983 259 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 NOGQ13253 232 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 SLBPQ14493 270 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 PDIA5Q14554 519 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 GRM4Q14833 912 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 NONOQ15233 471 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 CLUL1Q15846 466 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 IFI16Q16666 785 aaKnown RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 CDC42EP5Q6NZY7 148 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 RSRC2Q7L4I2 434 aaKnown RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 UBE3DQ7Z6J8 389 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 RAB11FIP4Q86YS3 637 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 FOXP4Q8IVH2 680 aaPredicted RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 TRIM58Q8NG06 486 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 NELFBQ8WX92 580 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 HOOK2Q96ED9 719 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 CDK5RAP3Q96JB5 506 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 AIFM3Q96NN9 605 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 SPZ1Q9BXG8 430 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 TMEM39BQ9GZU3 492 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 HSD3B7Q9H2F3 369 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 RIC8AQ9NPQ8 531 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 ABHD10Q9NUJ1 306 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 EXOC1Q9NV70 894 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 MCM9Q9NXL9 1143 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 BARHL2Q9NY43 387 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 VPS54Q9P1Q0 977 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 ADAMTS6Q9UKP5 1117 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 CAPN11Q9UMQ6 739 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 FZD1Q9UP38 647 aa6.74□□□□□ -1.33
CPSF2-205ENST00000556622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF2-205ENST00000556622 ROBO3Q96MS0 1386 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 LGALS16A8MUM7 142 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 IGF2BP3O00425 579 aaKnown RBP eCLIP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 PRKAB2O43741 272 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 GREM1O60565 184 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 TACC1O75410 805 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 LRIG2O94898 1065 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 PARP1P09874 1014 aaKnown RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 GCFC2P16383 781 aaKnown RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 TRIM21P19474 475 aaKnown RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 MCM7P33993 719 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 KRT9P35527 623 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 PBX1P40424 430 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 CTCFP49711 727 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 ADKP55263 362 aaKnown RBP6.73□□□□□ -1.33
CPSF2-205ENST00000556622 ZBED6P86452 979 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 TFAP4Q01664 338 aa6.73□□□□□ -1.33
CPSF2-205ENST00000556622 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms