RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MAELQ96JY0 434 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 TNIP3Q96KP6 325 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CCDC138Q96M89 665 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 NLRP4Q96MN2 994 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 SECISBP2Q96T21 854 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 HGH1Q9BTY7 390 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 VPS11Q9H270 941 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 VCXQ9H320 206 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ATP13A1Q9HD20 1204 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 HOMER2Q9NSB8 354 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 MRGBPQ9NV56 204 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 SAP30BPQ9UHR5 308 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 RCAN3Q9UKA8 241 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 EDARQ9UNE0 448 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CYP8B1Q9UNU6 501 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 RRP7AQ9Y3A4 280 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 PCDHGB7Q9Y5F8 929 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 MAP3K19Q56UN5 1328 aa6.65□□□□□ -1.35
TDP1-215ENST00000556498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.65□□□□□ -1.35
TDP1-215ENST00000556498 TNIKQ9UKE5 1360 aa6.65□□□□□ -1.35
TDP1-215ENST00000556498 IFT140Q96RY7 1462 aa6.65□□□□□ -1.35
TDP1-215ENST00000556498 TRAV6A0A075B6T7 132 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 A0A0A0MRY4 1105 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 OR5K4A6NMS3 321 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8KD6RF30 607 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 F8W810 466 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8TH3BQL2 631 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 PIK3R2O00459 728 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZW10O43264 779 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 STX6O43752 255 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 INMTO95050 263 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 CSPG5O95196 566 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 NPPAP01160 153 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 KRT6AP02538 564 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 SLC4A1P02730 911 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 KRT6BP04259 564 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 CYP11A1P05108 521 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8HP0CJ92 632 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 CDK4P11802 303 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 C21orf58P58505 322 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 MXRA7P84157 204 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 INSM1Q01101 510 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 PPFIA1Q13136 1202 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 AP3B2Q13367 1082 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 MOGQ16653 247 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 Q3ZCU0 254 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 FUT11Q495W5 492 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZMYM1Q5SVZ6 1142 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZNF658Q5TYW1 1059 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 TBC1D9BQ66K14 1250 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 SIGIRRQ6IA17 410 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 SARM1Q6SZW1 724 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 RHOUQ7L0Q8 258 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ERICH1Q86X53 443 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 FBXO11Q86XK2 927 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 NKAIN4Q8IVV8 208 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 SULF2Q8IWU5 870 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 TBC1D21Q8IYX1 336 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 LRRC47Q8N1G4 583 aaKnown RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 BEND7Q8N7W2 519 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 LSMEM1Q8N8F7 131 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 STKLD1Q8NE28 680 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 MGARPQ8TDB4 240 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 LEO1Q8WVC0 666 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 SPATA17Q96L03 361 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GDAP1L1Q96MZ0 367 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 NDNQ99608 321 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 DESI2Q9BSY9 194 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 EMILIN2Q9BXX0 1053 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 KLHL4Q9C0H6 718 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 NDEL1Q9GZM8 345 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GLT8D2Q9H1C3 349 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 MROH8Q9H579 483 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ELAC1Q9H777 363 aaKnown RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 CCDC177Q9NQR7 707 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 CNGB3Q9NQW8 809 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZNF277Q9NRM2 450 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 FARSBQ9NSD9 589 aaKnown RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 ATP8A2Q9NTI2 1148 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ANO10Q9NW15 660 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 RMND1Q9NWS8 449 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 EURLQ9NYK6 297 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 C9orf78Q9NZ63 289 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 ZNF624Q9P2J8 865 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 PDP2Q9P2J9 529 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 VANGL2Q9ULK5 521 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 TLR6Q9Y2C9 796 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 MTF2Q9Y483 593 aaPredicted RBP6.64□□□□□ -1.35
TDP1-215ENST00000556498 NR2E3Q9Y5X4 410 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 ABCC11Q96J66 1382 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 FHAD1B1AJZ9 1412 aa6.64□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA3Q08378 1498 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms