RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 GIT2Q14161 759 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 DHX8Q14562 1220 aaKnown RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 CBX2Q14781 532 aaPredicted RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 KARSQ15046 597 aaKnown RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 ZNF568Q3ZCX4 644 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 ZBTB33Q86T24 672 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 RNF135Q8IUD6 432 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 RNF168Q8IYW5 571 aaPredicted RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 SLC22A17Q8WUG5 538 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 PHF7Q9BWX1 381 aaPredicted RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 CDT1Q9H211 546 aa16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 MRPL17Q9NRX2 175 aaKnown RBP16.34■□□□□ 0.21
EFCAB11-207ENST00000555608 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.21
EFCAB11-207ENST00000555608 VWA8A3KMH1 1905 aa16.33■□□□□ 0.21
EFCAB11-207ENST00000555608 CITO14578 2027 aa16.33■□□□□ 0.21
EFCAB11-207ENST00000555608 LILRB3O75022 631 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 NR1I2O75469 434 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 EFEMP2O95967 443 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 BMP15O95972 392 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 MYBP10242 640 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 HARSP12081 509 aaKnown RBP16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 HOXB8P17481 243 aaPredicted RBP16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 PDCP20941 246 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 KLRC2P26717 231 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 GLUD2P49448 558 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 OSTNP61366 133 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 RASSF8Q8NHQ8 419 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 CALML4Q96GE6 196 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 AK8Q96MA6 479 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 ACO2Q99798 780 aaKnown RBP16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 TARS2Q9BW92 718 aaKnown RBP16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 EMILIN2Q9BXX0 1053 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 GPR62Q9BZJ7 368 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 POMKQ9H5K3 350 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 TMEM134Q9H6X4 195 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 ADAM28Q9UKQ2 775 aa16.33■□□□□ 0.2
EFCAB11-207ENST00000555608 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 KIF4AO95239 1232 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 PLS3P13797 630 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 PLCG1P19174 1290 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 MARCKSP29966 332 aaPredicted RBP16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 UBA7P41226 1012 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 CLCN4P51793 760 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 TUSC3Q13454 348 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 MCM6Q14566 821 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 HSP90AA2PQ14568 343 aaPredicted RBP16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 PTPAQ15257 358 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 NAB2Q15742 525 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 GLYCTKQ8IVS8 523 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 TIPINQ9BVW5 301 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 MRPL4Q9BYD3 311 aaKnown RBP16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 DZANK1Q9NVP4 752 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 TNFSF13BQ9Y275 285 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
EFCAB11-207ENST00000555608 TEX28O15482 410 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 THP07101 528 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ALADP13716 330 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 DSG1Q02413 1049 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ARSHQ5FYA8 562 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 KIAA0319Q5VV43 1072 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 TMC5Q6UXY8 1006 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 USP49Q70CQ1 688 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 INTS4Q96HW7 963 aaKnown RBP16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ZBTB45Q96K62 511 aaPredicted RBP16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 REEP2Q9BRK0 252 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ADAM7Q9H2U9 754 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 GOLGA2P5Q9HBQ8 144 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 PTPRHQ9HD43 1115 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ANKFY1Q9P2R3 1169 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
EFCAB11-207ENST00000555608 ABLIM1O14639 778 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 TADA2AO75478 443 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 RPL17P18621 184 aaKnown RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 GRM5P41594 1212 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 ITIH3Q06033 890 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 KIAA1841Q6NSI8 718 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 CES5AQ6NT32 575 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 PPFIBP1Q86W92 1011 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 RAD54LQ92698 747 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 EPSTI1Q96J88 318 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms