RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 DAW1Q8N136 415 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 KCTD17Q8N5Z5 321 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 RASSF8Q8NHQ8 419 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 PNMA5Q96PV4 448 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 SFXN1Q9H9B4 322 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 CACNG4Q9UBN1 327 aa26.89■■□□□ 1.9
PRKCH-216ENST00000555542 CUL4AQ13619 759 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 HSP90AA2PQ14568 343 aaPredicted RBP26.88■■□□□ 1.89
PRKCH-216ENST00000555542 ATAT1Q5SQI0 421 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 KANK3Q6NY19 840 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 TMC5Q6UXY8 1006 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 ZBTB33Q86T24 672 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 CALML4Q96GE6 196 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 AK8Q96MA6 479 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 MRPL4Q9BYD3 311 aaKnown RBP26.88■■□□□ 1.89
PRKCH-216ENST00000555542 POMKQ9H5K3 350 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 C17orf75Q9HAS0 396 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 DAXXQ9UER7 740 aaPredicted RBP26.88■■□□□ 1.89
PRKCH-216ENST00000555542 RBM19Q9Y4C8 960 aaKnown RBP26.88■■□□□ 1.89
PRKCH-216ENST00000555542 MYH11P35749 1972 aa26.88■■□□□ 1.89
PRKCH-216ENST00000555542 SFI1A8K8P3 1242 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 LILRB3O75022 631 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 GUCY2CP25092 1073 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 UBA7P41226 1012 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 USP41Q3LFD5 358 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 ZNF568Q3ZCX4 644 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 ELMSAN1Q6PJG2 1045 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 RNF168Q8IYW5 571 aaPredicted RBP26.87■■□□□ 1.89
PRKCH-216ENST00000555542 SYT2Q8N9I0 419 aaPredicted RBP26.87■■□□□ 1.89
PRKCH-216ENST00000555542 HASPINQ8TF76 798 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 B3GALT6Q96L58 329 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 TMEM134Q9H6X4 195 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 TNFSF13BQ9Y275 285 aa26.87■■□□□ 1.89
PRKCH-216ENST00000555542 SF3B1O75533 1304 aaKnown RBP eCLIP26.87■■□□□ 1.89
PRKCH-216ENST00000555542 PTGESO14684 152 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 SLC16A4O15374 487 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 TEX28O15482 410 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 PLA2G4BP0C869 781 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 SMTNP53814 917 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 YARSP54577 528 aaKnown RBP26.86■■□□□ 1.89
PRKCH-216ENST00000555542 DSG1Q02413 1049 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 STRN3Q13033 797 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 MAPK7Q13164 816 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 KIAA0319Q5VV43 1072 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 PAAF1Q9BRP4 392 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 TCHPQ9BT92 498 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 BACH2Q9BYV9 841 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 GPR62Q9BZJ7 368 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 ARHGAP28Q9P2N2 729 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 KCNG1Q9UIX4 513 aa26.86■■□□□ 1.89
PRKCH-216ENST00000555542 GLUD1P00367 558 aa26.85■■□□□ 1.89
PRKCH-216ENST00000555542 SF3A1Q15459 793 aaKnown RBP26.85■■□□□ 1.89
PRKCH-216ENST00000555542 RIN2Q8WYP3 895 aaPredicted RBP26.85■■□□□ 1.89
PRKCH-216ENST00000555542 EDAQ92838 391 aa26.85■■□□□ 1.89
PRKCH-216ENST00000555542 ACO2Q99798 780 aaKnown RBP26.85■■□□□ 1.89
PRKCH-216ENST00000555542 CCDC94Q9BW85 323 aaPredicted RBP26.85■■□□□ 1.89
PRKCH-216ENST00000555542 MAN1C1Q9NR34 630 aa26.85■■□□□ 1.89
PRKCH-216ENST00000555542 KCND2Q9NZV8 630 aa26.85■■□□□ 1.89
PRKCH-216ENST00000555542 DPP7Q9UHL4 492 aa26.85■■□□□ 1.89
PRKCH-216ENST00000555542 PLS3P13797 630 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 SLC12A3P55017 1021 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 OSTNP61366 133 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 TMEM119Q4V9L6 283 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 GLRA4Q5JXX5 417 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 GLYCTKQ8IVS8 523 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 TARS2Q9BW92 718 aaKnown RBP26.84■■□□□ 1.89
PRKCH-216ENST00000555542 CXCL16Q9H2A7 254 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.84■■□□□ 1.89
PRKCH-216ENST00000555542 TOPORSQ9NS56 1045 aaPredicted RBP26.84■■□□□ 1.89
PRKCH-216ENST00000555542 CHST7Q9NS84 486 aa26.84■■□□□ 1.89
PRKCH-216ENST00000555542 PLXNA3P51805 1871 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 SLC26A4O43511 780 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 KIF4AO95239 1232 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 EFEMP2O95967 443 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 MYBP10242 640 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 HARSP12081 509 aaKnown RBP26.83■■□□□ 1.89
PRKCH-216ENST00000555542 CACNB1Q02641 598 aaPredicted RBP26.83■■□□□ 1.89
PRKCH-216ENST00000555542 CREMQ03060 361 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 DHX8Q14562 1220 aaKnown RBP26.83■■□□□ 1.89
PRKCH-216ENST00000555542 CEP57Q86XR8 500 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 TDRD5Q8NAT2 981 aaKnown RBP26.83■■□□□ 1.89
PRKCH-216ENST00000555542 CDT1Q9H211 546 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 RXFP1Q9HBX9 757 aa26.83■■□□□ 1.89
PRKCH-216ENST00000555542 LONP1P36776 959 aaKnown RBP26.82■■□□□ 1.88
PRKCH-216ENST00000555542 ZXDAP98168 799 aa26.82■■□□□ 1.88
PRKCH-216ENST00000555542 PALB2Q86YC2 1186 aa26.82■■□□□ 1.88
PRKCH-216ENST00000555542 SPIRE2Q8WWL2 714 aa26.82■■□□□ 1.88
PRKCH-216ENST00000555542 ANKFY1Q9P2R3 1169 aa26.82■■□□□ 1.88
PRKCH-216ENST00000555542 NPHP3-ACAD11A0A0J9YXS1 232 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 C2CD4DB7Z1M9 353 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 KRT18P05783 430 aaKnown RBP26.81■■□□□ 1.88
PRKCH-216ENST00000555542 GRM5P41594 1212 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 FAM171A1Q5VUB5 890 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 MPZL3Q6UWV2 235 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 TAS1R3Q7RTX0 852 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 GPR149Q86SP6 731 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 GPBP1Q86WP2 473 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 CEP120Q8N960 986 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 FOXD4L1Q9NU39 408 aa26.81■■□□□ 1.88
PRKCH-216ENST00000555542 LARSQ9P2J5 1176 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms