RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NAMPTP43490 491 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 HADHBP55084 474 aaKnown RBP26.16■■□□□ 1.78
TMEM260-207ENST00000555497 CRELD2Q6UXH1 353 aaPredicted RBP26.16■■□□□ 1.78
TMEM260-207ENST00000555497 ERO1BQ86YB8 467 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 IFT81Q8WYA0 676 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 FGD4Q96M96 766 aa26.16■■□□□ 1.78
TMEM260-207ENST00000555497 ARIH2O95376 493 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 GPC5P78333 572 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 STRN3Q13033 797 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 DRP2Q13474 957 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 ZBTB41Q5SVQ8 909 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 EMBQ6PCB8 327 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 RHOT2Q8IXI1 618 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 SLC7A3Q8WY07 619 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 CAVIN3Q969G5 261 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 CTTNBP2NLQ9P2B4 639 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 PTPRJQ12913 1337 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 ATMINO43313 823 aaPredicted RBP26.15■■□□□ 1.78
TMEM260-207ENST00000555497 GGPS1O95749 300 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 CLDN10P78369 228 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 Q3C1V9 767 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 USP37Q86T82 979 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 DEPTORQ8TB45 409 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 DDX1Q92499 740 aaKnown RBP26.15■■□□□ 1.78
TMEM260-207ENST00000555497 KCNN1Q92952 543 aa26.15■■□□□ 1.78
TMEM260-207ENST00000555497 CALR3Q96L12 384 aaKnown RBP26.15■■□□□ 1.78
TMEM260-207ENST00000555497 DDX47Q9H0S4 455 aaKnown RBP26.15■■□□□ 1.78
TMEM260-207ENST00000555497 AGO2Q9UKV8 859 aaKnown RBP26.15■■□□□ 1.78
TMEM260-207ENST00000555497 KRIT1O00522 736 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 STAT5BP51692 787 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 ENPEPQ07075 957 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 PSMD6Q15008 389 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 TCEAL1Q15170 157 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 CDCA5Q96FF9 252 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 TARS2Q9BW92 718 aaKnown RBP26.14■■□□□ 1.78
TMEM260-207ENST00000555497 RBPJLQ9UBG7 517 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 ALG6Q9Y672 507 aa26.14■■□□□ 1.78
TMEM260-207ENST00000555497 K7ERI5 159 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 RNF40O75150 1001 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 GZMAP12544 262 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 TCF7P36402 384 aaPredicted RBP26.14■■□□□ 1.77
TMEM260-207ENST00000555497 MOGSQ13724 837 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 ALG3Q92685 438 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 NR2E1Q9Y466 385 aa26.14■■□□□ 1.77
TMEM260-207ENST00000555497 SPDYE5A6NIY4 337 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 CXCL11O14625 94 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 SART1O43290 800 aaKnown RBP26.13■■□□□ 1.77
TMEM260-207ENST00000555497 GRIN3BO60391 1043 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 PIGRP01833 764 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 NEDD9Q14511 834 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 ANKRD13AQ8IZ07 590 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 UPF1Q92900 1129 aaKnown RBP eCLIP26.13■■□□□ 1.77
TMEM260-207ENST00000555497 KCNG1Q9UIX4 513 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 SRCAPQ6ZRS2 3230 aa26.13■■□□□ 1.77
TMEM260-207ENST00000555497 C4BPAP04003 597 aaKnown RBP26.12■■□□□ 1.77
TMEM260-207ENST00000555497 ABCD1P33897 745 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 ERVK-9P63128 1117 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 CDR2Q01850 454 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 CAPSQ13938 189 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 KIAA1586Q9HCI6 787 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 AGTPBP1Q9UPW5 1226 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 GOLGA6BA6NDN3 693 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 TDRD10Q5VZ19 366 aaKnown RBP26.12■■□□□ 1.77
TMEM260-207ENST00000555497 AFAP1L1Q8TED9 768 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 SEPT1Q8WYJ6 367 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 EXOC4Q96A65 974 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 NRBP2Q9NSY0 501 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 TTC7AQ9ULT0 858 aaPredicted RBP26.12■■□□□ 1.77
TMEM260-207ENST00000555497 KCNH4Q9UQ05 1017 aa26.12■■□□□ 1.77
TMEM260-207ENST00000555497 MCM3APO60318 1980 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 TTLL13PA6NNM8 815 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 FGGP02679 453 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 TGFB3P10600 412 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 RFC5P40937 340 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 PAK2Q13177 524 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 ZNF211Q13398 564 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-207ENST00000555497 ZACNQ401N2 412 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 METTL7BQ6UX53 244 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 SPON1Q9HCB6 807 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 TMEM110-MUSTN1A8MSY1 372 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 BHMG1C9JSJ3 638 aaPredicted RBP26.11■■□□□ 1.77
TMEM260-207ENST00000555497 VNN1O95497 513 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 TNNI1P19237 187 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 PDE6CP51160 858 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 GCNT1Q02742 428 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 C11orf63Q6NUN7 778 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 ANKFY1Q9P2R3 1169 aa26.11■■□□□ 1.77
TMEM260-207ENST00000555497 ERICH4A6NGS2 130 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 HLA-DRAP01903 254 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 KRT5P13647 590 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 YBX3P16989 372 aaKnown RBP eCLIP26.1■■□□□ 1.77
TMEM260-207ENST00000555497 TTLL12Q14166 644 aaPredicted RBP26.1■■□□□ 1.77
TMEM260-207ENST00000555497 C9orf131Q5VYM1 1079 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 FAM160B1Q5W0V3 765 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 AADACL2Q6P093 401 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 TRIM50Q86XT4 487 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 CPNE8Q86YQ8 564 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 KRT35Q92764 455 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 FNBP1Q96RU3 617 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 A0A0B4J269 797 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms