RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MRPL4Q9BYD3 311 aaKnown RBP13.64□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC6B-205ENST00000555269 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ABLIM1O14639 778 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CUTAO60888 179 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PPP6R2O75170 966 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 RECQL4O94761 1208 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 YEATS4O95619 227 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 BRD1O95696 1058 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 IGFBP6P24592 240 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 NMT1P30419 496 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TXLNAP40222 546 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ZNF131P52739 623 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DSC1Q08554 894 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CLUL1Q15846 466 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 AAK1Q2M2I8 961 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 SEZ6Q53EL9 994 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MRPL43Q8N983 215 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 RSPH1Q8WYR4 309 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DDX12PQ92771 950 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PAAF1Q9BRP4 392 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TMEM175Q9BSA9 504 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CDT1Q9H211 546 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 LARSQ9P2J5 1176 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 RCOR1Q9UKL0 485 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PCDHA7Q9UN72 937 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PHLPP2Q6ZVD8 1323 aa13.63□□□□□ -0.23
TRAPPC6B-205ENST00000555269 BRWD1Q9NSI6 2320 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 C2orf71A6NGG8 1288 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PTGESO14684 152 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 NCK2O43639 380 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TRAK2O60296 914 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PROZP22891 400 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CA8P35219 290 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 STAT6P42226 847 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 STRN3Q13033 797 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 LEXMQ3ZCV2 418 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PDE12Q6L8Q7 609 aaKnown RBP13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 VN1R2Q8NFZ6 395 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ADAMTS19Q8TE59 1207 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 NGRNQ9NPE2 291 aaKnown RBP13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CLEC1BQ9P126 229 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CASTOR2A6NHX0 329 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MEFVO15553 781 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TBX10O75333 385 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TBCAO75347 108 aaKnown RBP13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 GLP2RO95838 553 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ME1P48163 572 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 NAB2Q15742 525 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DUSP6Q16828 381 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ZNF568Q3ZCX4 644 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 GLRA4Q5JXX5 417 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 LLGL2Q6P1M3 1020 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PPP2R3CQ969Q6 453 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ZBP1Q9H171 429 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 IKZF4Q9H2S9 585 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CFAP45Q9UL16 551 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 BARX2Q9UMQ3 279 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
TRAPPC6B-205ENST00000555269 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 K7ENM7 598 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 TOM1L1O75674 476 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 THP07101 528 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MCF2P10911 925 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 IL9P15248 144 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 GRM5P41594 1212 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 GRIK3Q13003 919 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 E2F4Q16254 413 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ATL3Q6DD88 541 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 PTCRAQ6ISU1 281 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 MPZL3Q6UWV2 235 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 ZNF720Q7Z2F6 126 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 FAM178BQ8IXR5 827 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 KCNG4Q8TDN1 519 aa13.6□□□□□ -0.23
TRAPPC6B-205ENST00000555269 DHX58Q96C10 678 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms