RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TCHHQ07283 1943 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
SYNE2-214ENST00000554928 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ERVFC1P60507 584 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ASIC1P78348 528 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
SYNE2-214ENST00000554928 DSC1Q08554 894 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 NAB2Q15742 525 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 DCAF4L1Q3SXM0 396 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 TCEAL5Q5H9L2 206 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ZSWIM2Q8NEG5 633 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ADPGKQ9BRR6 497 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
SYNE2-214ENST00000554928 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
SYNE2-214ENST00000554928 ATG2AQ2TAZ0 1938 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 MYH11P35749 1972 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 A0A1W2PQD8 194 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 KLRC4O43908 158 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 FAM189A1O60320 539 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 TOM1L1O75674 476 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 PRPF6O94906 941 aaKnown RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 PIGRP01833 764 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 SLFN14P0C7P3 912 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 MCF2P10911 925 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 GAP43P17677 238 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 TNFSF9P41273 254 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 GRM5P41594 1212 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 MCL1Q07820 350 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 BICD1Q96G01 975 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 ZMAT2Q96NC0 199 aaKnown RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 TCHPQ9BT92 498 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 MRPL44Q9H9J2 332 aaKnown RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 SPG21Q9NZD8 308 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 PRG3Q9Y2Y8 225 aaPredicted RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 SPTBN5Q9NRC6 3674 aaKnown RBP13.53□□□□□ -0.24
SYNE2-214ENST00000554928 PLXNA4Q9HCM2 1894 aa13.53□□□□□ -0.24
SYNE2-214ENST00000554928 NRP1O14786 923 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
SYNE2-214ENST00000554928 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
SYNE2-214ENST00000554928 GCNT3O95395 438 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 HOXD13P35453 343 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 SYKP43405 635 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 LIG4P49917 911 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 PLCB3Q01970 1234 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 EHHADHQ08426 723 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 CNNM4Q6P4Q7 775 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 HACE1Q8IYU2 909 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 IGSF21Q96ID5 467 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
SYNE2-214ENST00000554928 ZMYM2Q9UBW7 1377 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 H0YCG3 227 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 FSCN2O14926 492 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 CLDN3O15551 220 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 CXCL8P10145 99 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 ADSSP30520 456 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 OR1G1P47890 313 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 SPAG1Q07617 926 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 GRIK3Q13003 919 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 PTPROQ16827 1216 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 L1TD1Q5T7N2 865 aaKnown RBP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 PLPP4Q5VZY2 271 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 ALKAL1Q6UXT8 129 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 TAS1R1Q7RTX1 841 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 CCDC65Q8IXS2 484 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 CEP57L1Q8IYX8 460 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 SNX27Q96L92 541 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
SYNE2-214ENST00000554928 RPS6KC1Q96S38 1066 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 LMAN2LQ9H0V9 348 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms