RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SPATA31C2B4DYI2 1134 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 TGFB1I1O43294 461 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 NAA35Q5VZE5 725 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 CPLX4Q7Z7G2 160 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 CCDC50Q8IVM0 306 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 FAM84AQ96KN4 292 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 KLC4Q9NSK0 619 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 HYOU1Q9Y4L1 999 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 EVI5O60447 810 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 PRKCBP05771 671 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 ZNF286BP0CG31 522 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 PTK2Q05397 1052 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
PCNX1-209ENST00000554879 ZNF862O60290 1169 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 MESDQ14696 234 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 GSPT2Q8IYD1 628 aaKnown RBP17.77■□□□□ 0.44
PCNX1-209ENST00000554879 APEX2Q9UBZ4 518 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 COL4A5P29400 1685 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 KIF3CO14782 793 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 KCNA2P16389 499 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 WHAMMP3Q1A5X7 153 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 SWT1Q5T5J6 900 aaKnown RBP17.77■□□□□ 0.44
PCNX1-209ENST00000554879 FBXL13Q8NEE6 735 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 MKNK1Q9BUB5 465 aa17.77■□□□□ 0.44
PCNX1-209ENST00000554879 MRPL4Q9BYD3 311 aaKnown RBP17.77■□□□□ 0.44
PCNX1-209ENST00000554879 ANKRD63C9JTQ0 380 aa17.77■□□□□ 0.43
PCNX1-209ENST00000554879 DHX15O43143 795 aaKnown RBP17.77■□□□□ 0.43
PCNX1-209ENST00000554879 ATP1A1P05023 1023 aaKnown RBP17.77■□□□□ 0.43
PCNX1-209ENST00000554879 PBX1P40424 430 aa17.77■□□□□ 0.43
PCNX1-209ENST00000554879 HSDL1Q3SXM5 330 aa17.77■□□□□ 0.43
PCNX1-209ENST00000554879 FAM167BQ9BTA0 163 aa17.77■□□□□ 0.43
PCNX1-209ENST00000554879 EDEM3Q9BZQ6 932 aa17.77■□□□□ 0.43
PCNX1-209ENST00000554879 A0A0G2JLL6 359 aaPredicted RBP17.76■□□□□ 0.43
PCNX1-209ENST00000554879 SOWAHBA6NEL2 793 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 PALMO75781 387 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 ADCYAP1R1P41586 468 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 MYO1EQ12965 1108 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 PRRT2Q7Z6L0 340 aaPredicted RBP17.76■□□□□ 0.43
PCNX1-209ENST00000554879 CRYGNQ8WXF5 182 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 ERAP1Q9NZ08 941 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 RBPJLQ9UBG7 517 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 SIK3Q9Y2K2 1263 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 A0A087X0T9 212 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 A0A1W2PQJ5 194 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 BTBD19C9JJ37 291 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 CYP26A1O43174 497 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 FAM228BP0C875 321 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 SOX5P35711 763 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 CATSPER4Q7RTX7 472 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 CCDC113Q9H0I3 377 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 AMFRQ9UKV5 643 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 CETN2P41208 172 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 GCLCP48506 637 aaPredicted RBP17.76■□□□□ 0.43
PCNX1-209ENST00000554879 VSNL1P62760 191 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 C8orf74Q6P047 294 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 PASD1Q8IV76 773 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 EXOC8Q8IYI6 725 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 ZBTB45Q96K62 511 aaPredicted RBP17.76■□□□□ 0.43
PCNX1-209ENST00000554879 TRIM31Q9BZY9 425 aa17.76■□□□□ 0.43
PCNX1-209ENST00000554879 TGFB3P10600 412 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 PPFIA1Q13136 1202 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 CFAP221Q4G0U5 840 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 GOLPH3Q9H4A6 298 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 SH3BP1Q9Y3L3 701 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 UBE4BO95155 1302 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 DLG4P78352 724 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 KCNMA1Q12791 1236 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 ZNF653Q96CK0 615 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 RPF1Q9H9Y2 349 aaKnown RBP17.75■□□□□ 0.43
PCNX1-209ENST00000554879 LDHAP00338 332 aaKnown RBP17.75■□□□□ 0.43
PCNX1-209ENST00000554879 ABL1P00519 1130 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 PCK1P35558 622 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 TUBB2AQ13885 445 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 TUBB2BQ9BVA1 445 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 THAP12O43422 761 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 PHKA2P46019 1235 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 NFX1Q12986 1120 aaKnown RBP17.75■□□□□ 0.43
PCNX1-209ENST00000554879 CBWD6Q4V339 395 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 CBWD3Q5JTY5 395 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 CBWD5Q5RIA9 395 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
PCNX1-209ENST00000554879 CHORDC1Q9UHD1 332 aaPredicted RBP17.75■□□□□ 0.43
PCNX1-209ENST00000554879 PGAP2Q9UHJ9 254 aa17.75■□□□□ 0.43
PCNX1-209ENST00000554879 EPC2Q52LR7 807 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 PRAMEF19Q5SWL8 479 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 TMEM270Q6UE05 265 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 M0QZ92 97 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 TCP1P17987 556 aaKnown RBP17.74■□□□□ 0.43
PCNX1-209ENST00000554879 GGCXP38435 758 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 RFC5P40937 340 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 SLC18A3Q16572 532 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 ANKRD36BP1Q96IX9 119 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
PCNX1-209ENST00000554879 TFRCP02786 760 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms