RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 USP17L6PQ6QN14 398 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 CUL5Q93034 780 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 RASSF4Q9H2L5 321 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 IGFLR1Q9H665 355 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 HDAC6Q9UBN7 1215 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 HYOU1Q9Y4L1 999 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 FRYLO94915 3013 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 ATRXP46100 2492 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 GRID2IPA4D2P6 1211 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 UPP2O95045 317 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 ARIH2O95376 493 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 EPB41P11171 864 aaKnown RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 PLCG1P19174 1290 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 ASIC1P78348 528 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 COASYQ13057 564 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 FIBCD1Q8N539 461 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 C7orf31Q8N865 590 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 CHP1Q99653 195 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 CLEC1BQ9P126 229 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
SRP54-205ENST00000554803 RWDD3Q9Y3V2 267 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
SRP54-205ENST00000554803 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 SHOX2O60902 331 aaPredicted RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 CFBP00751 764 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 PDGFBP01127 241 aaPredicted RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 IDEP14735 1019 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 CASP1P29466 404 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 BMPR1AP36894 532 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 PSEN2P49810 448 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 INF2Q27J81 1249 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 SLC30A10Q6XR72 485 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 FRMD5Q7Z6J6 570 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 SRLQ86TD4 932 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 NEK11Q8NG66 645 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 CDK5RAP3Q96JB5 506 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 ZSWIM4Q9H7M6 989 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
SRP54-205ENST00000554803 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
SRP54-205ENST00000554803 USP24Q9UPU5 2620 aa12.08□□□□□ -0.47
SRP54-205ENST00000554803 BTNL10A8MVZ5 291 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 HAS3O00219 553 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
SRP54-205ENST00000554803 EDIL3O43854 480 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 RNF40O75150 1001 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 GH1P01241 217 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 HSD17B4P51659 736 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 MARSP56192 900 aaKnown RBP12.08□□□□□ -0.48
SRP54-205ENST00000554803 ARHGAP1Q07960 439 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 TRAF1Q13077 416 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 IFI16Q16666 785 aaKnown RBP12.08□□□□□ -0.48
SRP54-205ENST00000554803 MIIPQ5JXC2 388 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 EFHBQ8N7U6 833 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 FAM76AQ8TAV0 307 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 SEPT8Q92599 483 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 CAVIN3Q969G5 261 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
SRP54-205ENST00000554803 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 KATNAL1Q9BW62 490 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 EPC1Q9H2F5 836 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms