RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TMOD1P28289 359 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 YARSP54577 528 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CYP24A1Q07973 514 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 MGAT5Q09328 741 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NFIAQ12857 509 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PGM5Q15124 567 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ASIC2Q16515 512 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CCNG2Q16589 344 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TTBK2Q6IQ55 1244 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 C8orf82Q6P1X6 216 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 POTEBQ6S5H4 581 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 B4GALNT4Q76KP1 1039 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 GALNT7Q86SF2 657 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZCCHC9Q8N567 271 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PARD3BQ8TEW8 1205 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 LMBR1Q8WVP7 490 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NT5C3BQ969T7 300 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TADA1Q96BN2 335 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PTCD3Q96EY7 689 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM47Q96LD4 638 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM117Q9H0C3 514 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZCCHC17Q9NP64 241 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 XPNPEP1Q9NQW7 623 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 KANSL3Q9P2N6 904 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 KCNG1Q9UIX4 513 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF180Q9UJW8 692 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 VPS28Q9UK41 221 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZBTB21Q9ULJ3 1066 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PCDHA12Q9UN75 941 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 BAZ2BQ9UIF8 2168 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CFAP73A6NFT4 308 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 E9PMD0 336 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 GAS2O43903 313 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 RARAP10276 462 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SLC9A1P19634 815 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 STAT1P42224 750 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 GALCP54803 685 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PPP2R2AP63151 447 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PPP3CAQ08209 521 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 IFFO1Q0D2I5 559 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SPRED3Q2MJR0 410 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SGSM1Q2NKQ1 1148 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 FOXD4L6Q3SYB3 417 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CEP55Q53EZ4 464 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 MFSD14BQ5SR56 506 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 FOXD4L3Q6VB84 417 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF467Q7Z7K2 595 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 VSIG10LQ86VR7 867 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NLRP14Q86W24 1093 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 RAB11FIP4Q86YS3 637 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF444Q8N0Y2 327 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 DNERQ8NFT8 737 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SPATA18Q8TC71 538 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SNX29Q8TEQ0 813 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 INPP5DQ92835 1189 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM11Q96F44 468 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NUP88Q99567 741 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 HERPUD2Q9BSE4 406 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 LSM14BQ9BX40 385 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CAPS2Q9BXY5 557 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 EPB41L1Q9H4G0 881 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ATP6V0A4Q9HBG4 840 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TFCP2L1Q9NZI6 479 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CWC15Q9P013 229 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 DERAQ9Y315 318 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ST14Q9Y5Y6 855 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ALPK3Q96L96 1907 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 A0A0B4J269 797 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 GOLGA6BA6NDN3 693 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 CAPN14A8MX76 684 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 DNM1LO00429 736 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 GNPATO15228 680 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 SRGAP2O75044 1071 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 CCNE2O96020 404 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 P4HBP07237 508 aaKnown RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 ITIH2P19823 946 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 COILP38432 576 aaPredicted RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 MAGEA1P43355 309 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 HIRAP54198 1017 aaPredicted RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 SLC8A3P57103 927 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 MYL6P60660 151 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 TUBB3Q13509 450 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 AMHR2Q16671 573 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 BRDTQ58F21 947 aaPredicted RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 DPP8Q6V1X1 898 aaPredicted RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 RNF165Q6ZSG1 346 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM126BQ8IUX1 230 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 ARHGEF19Q8IW93 802 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 EXD1Q8NHP7 514 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 SLC35G2Q8TBE7 412 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 SLC16A10Q8TF71 515 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 SEMA4DQ92854 862 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 CYFIP2Q96F07 1278 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 PCYT2Q99447 389 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 NAP1L3Q99457 506 aaPredicted RBP3.71□□□□□ -1.81
SEC23A-207ENST00000554615 C19orf43Q9BQ61 176 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 DCLK3Q9C098 648 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 LRMDAQ9H2I8 198 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 LZTFL1Q9NQ48 299 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms