RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 SLC6A16Q9GZN6 736 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ZHX3Q9H4I2 956 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 CNTNAP2Q9UHC6 1331 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 FBXO2Q9UK22 296 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ODF2LQ9ULJ1 636 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 TET1Q8NFU7 2136 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 N4BP3O15049 544 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 TSPAN1O60635 241 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 LPXNO60711 386 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 ZNF623O75123 536 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 FGFR1P11362 822 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 PLS3P13797 630 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 SCP2P22307 547 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 DDIT3P35638 169 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 PPM1AP35813 382 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 BMPR1AP36894 532 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 AMPD3Q01432 767 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 CDCA2Q69YH5 1023 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-209ENST00000553855 SLC27A1Q6PCB7 646 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 C1orf186Q6ZWK4 172 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-209ENST00000553855 THNSL1Q8IYQ7 743 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 SIX5Q8N196 739 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 PPM1EQ8WY54 764 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 CPB2Q96IY4 423 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 TCHPQ9BT92 498 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 MINDY3Q9H8M7 445 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 PCDHB2Q9Y5E7 798 aa9.17□□□□□ -0.94
PSEN1-209ENST00000553855 EVPLQ92817 2033 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 H3BNC9 293 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 ACKR2O00590 384 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 GGCXP38435 758 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 NPTX2P47972 431 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 ALDH7A1P49419 539 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 KRT17Q04695 432 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 DNM1Q05193 864 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 GRIN1Q05586 938 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 FAM187BQ17R55 369 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 LONRF3Q496Y0 759 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 MYCT1Q8N699 235 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 TMEM87AQ8NBN3 555 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 BAP1Q92560 729 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 BICD1Q96G01 975 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 CCDC34Q96HJ3 373 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 RPS6KC1Q96S38 1066 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 MRPL4Q9BYD3 311 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 FZD8Q9H461 694 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 CUEDC2Q9H467 287 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 PARVGQ9HBI0 331 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 TYW1Q9NV66 732 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 PARP2Q9UGN5 583 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 INPP5FQ9Y2H2 1132 aa9.16□□□□□ -0.94
PSEN1-209ENST00000553855 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
PSEN1-209ENST00000553855 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 GOLGA6L4A6NEF3 574 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 SFI1A8K8P3 1242 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 RFXAPO00287 272 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 SLC16A4O15374 487 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 DKK1O94907 266 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 NPTXRO95502 500 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 HOXA11P31270 313 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-209ENST00000553855 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
PSEN1-209ENST00000553855 CCDC85BQ15834 202 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-209ENST00000553855 ATF7IP2Q5U623 682 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 CEP57L1Q8IYX8 460 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 PDILTQ8N807 584 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 BSNDQ8WZ55 320 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 P2RX5Q93086 422 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 MRPL38Q96DV4 380 aaKnown RBP9.15□□□□□ -0.94
PSEN1-209ENST00000553855 CASD1Q96PB1 797 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms