RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 MC3RP41968 323 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 CCL14Q16627 93 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 VMACQ2NL98 169 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 LDHAL6AQ6ZMR3 332 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 UBE3BQ7Z3V4 1068 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 PLEKHH3Q7Z736 793 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 FAM84BQ96KN1 310 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-223ENST00000553686 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 CLDND1Q9NY35 253 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 COA3Q9Y2R0 106 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-223ENST00000553686 CACNA1GO43497 2377 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 PSME4Q14997 1843 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 H7BY64 318 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 BMP7P18075 431 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-223ENST00000553686 ITGB8P26012 769 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 GYG1P46976 350 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 SPP2Q13103 211 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 CHAF1AQ13111 956 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-223ENST00000553686 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-223ENST00000553686 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 MTERF2Q49AM1 385 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 CAVIN4Q5BKX8 364 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 TAF7LQ5H9L4 462 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 YOD1Q5VVQ6 348 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-223ENST00000553686 KSR2Q6VAB6 950 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 SLC44A5Q8NCS7 719 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 SEC14L1Q92503 715 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 PRRX2Q99811 253 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 GPR27Q9NS67 375 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 PFDN2Q9UHV9 154 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
ATXN3-223ENST00000553686 GRXCR1A8MXD5 290 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 IGKV5-2P06315 115 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 SLC5A1P13866 664 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 CCNA1P78396 465 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 GCKRQ14397 625 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 TMEM240Q5SV17 173 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-223ENST00000553686 MILR1Q7Z6M3 343 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 B3GNT8Q7Z7M8 397 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 Q8N1Y9 231 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 CNNM1Q9NRU3 951 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 PALD1Q9ULE6 856 aa7.28□□□□□ -1.24
ATXN3-223ENST00000553686 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 PI4KAP2A4QPH2 592 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 ENTPD3O75355 529 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 TIMP1P01033 207 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 HOXA7P31268 230 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-223ENST00000553686 SLC6A11P48066 632 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 HMGCS2P54868 508 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 SSRP1Q08945 709 aaKnown RBP7.27□□□□□ -1.25
ATXN3-223ENST00000553686 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-223ENST00000553686 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 MFSD5Q6N075 450 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 KCNT2Q6UVM3 1135 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 RSPO2Q6UXX9 243 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-223ENST00000553686 TMEM199Q8N511 208 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 PI4KAP1Q8N8J0 262 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 AS3MTQ9HBK9 375 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 TMOD4Q9NZQ9 345 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 MTCH2Q9Y6C9 303 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 PMF1-BGLAPU3KQ54 211 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 ZDBF2Q9HCK1 2354 aa7.27□□□□□ -1.25
ATXN3-223ENST00000553686 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
ATXN3-223ENST00000553686 BLACEA4D250 179 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 HGSO14964 777 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-223ENST00000553686 SEPT4O43236 478 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 DCXO43602 365 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 PQBP1O60828 265 aaKnown RBP7.26□□□□□ -1.25
ATXN3-223ENST00000553686 HOXC6P09630 235 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 CYP2C19P33261 490 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 ZEB1P37275 1124 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-223ENST00000553686 TMPOP42166 694 aaKnown RBP7.26□□□□□ -1.25
ATXN3-223ENST00000553686 HERVK_113P62684 666 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 LRRC41Q15345 812 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 SF3A1Q15459 793 aaKnown RBP7.26□□□□□ -1.25
ATXN3-223ENST00000553686 NTRK3Q16288 839 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 EPHA10Q5JZY3 1008 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 CCDC30Q5VVM6 783 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 ZNF365Q70YC5 407 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 SCUBE1Q8IWY4 988 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 SMARCC2Q8TAQ2 1214 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 FNIP1Q8TF40 1166 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 CDC6Q99741 560 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 JAM3Q9BX67 310 aa7.26□□□□□ -1.25
ATXN3-223ENST00000553686 ZCCHC4Q9H5U6 513 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms