RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TRIM75PA6NK02 468 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 B5MCH6 92 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 LEFTY2O00292 366 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 NARSO43776 548 aaKnown RBP8.84□□□□□ -0.99
PCNX1-205ENST00000553508 RAP2AP10114 183 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 FLT3LGP49771 235 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 SEPT2Q15019 361 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 FAM47AQ5JRC9 791 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 FNDC7Q5VTL7 733 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 GPRIN1Q7Z2K8 1008 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 OR10H5Q8NGA6 315 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 OR2I1PQ8NGU4 316 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 NRG4Q8WWG1 115 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 JADE3Q92613 823 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 PHACTR3Q96KR7 559 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 SMAD5Q99717 465 aaKnown RBP8.84□□□□□ -0.99
PCNX1-205ENST00000553508 NDC1Q9BTX1 674 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 ZNF277Q9NRM2 450 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-205ENST00000553508 SRRDQ9UH36 339 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 INTUQ9ULD6 942 aa8.84□□□□□ -0.99
PCNX1-205ENST00000553508 ANKRD62A6NC57 917 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 GRXCR1A8MXD5 290 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 RAP2BP61225 183 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 PCBP2Q15366 365 aaKnown RBP eCLIP8.83□□□□□ -1
PCNX1-205ENST00000553508 PTPROQ16827 1216 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 METTL24Q5JXM2 366 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 ZNF572Q7Z3I7 529 aaPredicted RBP8.83□□□□□ -1
PCNX1-205ENST00000553508 ZNF276Q8N554 614 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.83□□□□□ -1
PCNX1-205ENST00000553508 CCHCR1Q8TD31 782 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 KCNH6Q9H252 994 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 ZNF768Q9H5H4 540 aaKnown RBP8.83□□□□□ -1
PCNX1-205ENST00000553508 NRDE2Q9H7Z3 1164 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 CLCA2Q9UQC9 943 aa8.83□□□□□ -1
PCNX1-205ENST00000553508 WASHC2CQ9Y4E1 1318 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 CXorf49A8MYA2 514 aaPredicted RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 ALG1L2C9J202 215 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 GABRDO14764 452 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA12O60330 932 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 RECQL4O94761 1208 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 ACVRL1P37023 503 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 ABHD18Q0P651 414 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 BMT2Q1RMZ1 405 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 AFMIDQ63HM1 303 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 SYT12Q8IV01 421 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 ZCRB1Q8TBF4 217 aaKnown RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 ZNF483Q8TF39 744 aaPredicted RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 HOXB13Q92826 284 aaPredicted RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 CLIP3Q96DZ5 547 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
PCNX1-205ENST00000553508 LANCL2Q9NS86 450 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 TRPM5Q9NZQ8 1165 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 AJAP1Q9UKB5 411 aaPredicted RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 SIK3Q9Y2K2 1263 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA9Q9Y5G4 932 aaKnown RBP8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA8Q9Y5G5 932 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA7Q9Y5G6 932 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA6Q9Y5G7 932 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 PCDHGA3Q9Y5H0 932 aa8.82□□□□□ -1
PCNX1-205ENST00000553508 KLHL33A6NCF5 533 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 NDUFS2O75306 463 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 ENDOD1O94919 500 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 RNASE9P60153 205 aaKnown RBP8.81□□□□□ -1
PCNX1-205ENST00000553508 NHLH2Q02577 135 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 MGAT2Q10469 447 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 KLF10Q13118 480 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 PNMA8AQ86V59 439 aaPredicted RBP8.81□□□□□ -1
PCNX1-205ENST00000553508 FAM177A1Q8N128 213 aaPredicted RBP8.81□□□□□ -1
PCNX1-205ENST00000553508 SLC25A43Q8WUT9 341 aaPredicted RBP8.81□□□□□ -1
PCNX1-205ENST00000553508 TUBD1Q9UJT1 453 aa8.81□□□□□ -1
PCNX1-205ENST00000553508 ING1Q9UK53 422 aaPredicted RBP8.81□□□□□ -1
PCNX1-205ENST00000553508 SHTN1A0MZ66 631 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 RBP3P10745 1247 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 ALOX15P16050 662 aaPredicted RBP8.8□□□□□ -1
PCNX1-205ENST00000553508 FPR1P21462 350 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 C5AR1P21730 350 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 MCM7P33993 719 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 SLC6A9P48067 706 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 CLRN1P58418 232 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 PTPN21Q16825 1174 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 ATXN7L2Q5T6C5 722 aaPredicted RBP8.8□□□□□ -1
PCNX1-205ENST00000553508 RHOT1Q8IXI2 618 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.8□□□□□ -1
PCNX1-205ENST00000553508 ZFP28Q8NHY6 868 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 NEU4Q8WWR8 484 aaPredicted RBP8.8□□□□□ -1
PCNX1-205ENST00000553508 C7orf25Q9BPX7 421 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 MRI1Q9BV20 369 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 ACTL7AQ9Y615 435 aa8.8□□□□□ -1
PCNX1-205ENST00000553508 ATRNL1Q5VV63 1379 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 FAM171A2A8MVW0 826 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 IL2RBP14784 551 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 IBSPP21815 317 aaPredicted RBP8.79□□□□□ -1
PCNX1-205ENST00000553508 NR4A1P22736 598 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 SP140Q13342 867 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 GJC2Q5T442 439 aaPredicted RBP8.79□□□□□ -1
PCNX1-205ENST00000553508 RAB24Q969Q5 203 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 GPATCH3Q96I76 525 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 TMEM140Q9NV12 185 aa8.79□□□□□ -1
PCNX1-205ENST00000553508 MOCS1Q9NZB8 636 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 438.7 ms