RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 DENND3A2RUS2 1198 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 H0YGN5 161 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 TTI1O43156 1089 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ATP9AO75110 1047 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PHF2O75151 1096 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CYP1A2P05177 515 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ADRB2P07550 413 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ITGA4P13612 1032 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CTNNA1P35221 906 aaKnown RBP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 IREB2P48200 963 aaKnown RBP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CDR2Q01850 454 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 GNPTABQ3T906 1256 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CEP85LQ5SZL2 805 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 AGBL2Q5U5Z8 902 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 DUPD1Q68J44 220 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 TMC3Q7Z5M5 1100 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PPM1KQ8N3J5 372 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 BCAS4Q8TDM0 211 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 SLC20A1Q8WUM9 679 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 RSPH14Q9UHP6 348 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 NFS1Q9Y697 457 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 DAPK3O43293 454 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PPFIA2O75334 1257 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CTNNA2P26232 953 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 SLC20A2Q08357 652 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 B4GALNT4Q76KP1 1039 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ARMC9Q7Z3E5 817 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 GPD1LQ8N335 351 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 C3orf20Q8ND61 904 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PLEKHO2Q8TD55 490 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 TRIM11Q96F44 468 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 FMO2Q99518 471 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 GBA2Q9HCG7 927 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 PDLIM7Q9NR12 457 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHMT2-205ENST00000553474 MTUS1Q9ULD2 1270 aa13.88□□□□□ -0.19
SHMT2-205ENST00000553474 TISP43B9A030 160 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 MYBL1P10243 752 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CYP11B1P15538 503 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 KCNA2P16389 499 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CHRNB2P17787 502 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 DSG3P32926 999 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PEX5P50542 639 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 BPIFB4P59827 614 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CLDN10P78369 228 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CYP24A1Q07973 514 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 BAATQ14032 418 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 TRADDQ15628 312 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CYP1B1Q16678 543 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 NOP9Q86U38 636 aaKnown RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 CD101Q93033 1021 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 KREMEN1Q96MU8 473 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PAGR1Q9BTK6 254 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PICK1Q9NRD5 415 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
SHMT2-205ENST00000553474 PASKQ96RG2 1323 aa13.87□□□□□ -0.19
SHMT2-205ENST00000553474 SGPL1O95470 568 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 CDR1P51861 262 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 FMO1Q01740 532 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 UAP1Q16222 522 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-205ENST00000553474 PLA2G4FQ68DD2 849 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 C2orf69Q8N8R5 385 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.86□□□□□ -0.194e-7■■□□□ 12.9
SHMT2-205ENST00000553474 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ALG3Q92685 438 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ZBTB9Q96C00 473 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ATG4CQ96DT6 458 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 KLRG1Q96E93 195 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ARHGAP28Q9P2N2 729 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 GABBR1Q9UBS5 961 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 PCDHA3Q9Y5H8 950 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 CSADQ9Y600 493 aa13.86□□□□□ -0.19
SHMT2-205ENST00000553474 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms