RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CFHP08603 1231 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 SRFP11831 508 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 LAMP2P13473 410 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 RPL17P18621 184 aaKnown RBP10.38□□□□□ -0.75
CHD8-203ENST00000553283 ATP2B1P20020 1258 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 TUSC3Q13454 348 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 HSP90AA2PQ14568 343 aaPredicted RBP10.38□□□□□ -0.75
CHD8-203ENST00000553283 FAM187BQ17R55 369 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 CDCA2Q69YH5 1023 aaPredicted RBP10.38□□□□□ -0.75
CHD8-203ENST00000553283 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 MAEAQ7L5Y9 396 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 MCPH1Q8NEM0 835 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 NKD2Q969F2 451 aaPredicted RBP10.38□□□□□ -0.75
CHD8-203ENST00000553283 SNX27Q96L92 541 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 NACC1Q96RE7 527 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 TTPALQ9BTX7 342 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 POLR3CQ9BUI4 534 aaPredicted RBP10.38□□□□□ -0.75
CHD8-203ENST00000553283 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 TUFT1Q9NNX1 390 aa10.38□□□□□ -0.75
CHD8-203ENST00000553283 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHD8-203ENST00000553283 ANHXE9PGG2 379 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 N4BP3O15049 544 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 JAK2O60674 1132 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 MED24O75448 989 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 CYP11B2P19099 503 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 FOSBP53539 338 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 ANGPT1Q15389 498 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 RTP2Q5QGT7 225 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 PRSS55Q6UWB4 352 aaPredicted RBP10.37□□□□□ -0.75
CHD8-203ENST00000553283 DENND4AQ7Z401 1863 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 LNX1Q8TBB1 728 aaPredicted RBP10.37□□□□□ -0.75
CHD8-203ENST00000553283 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 CLSTN3Q9BQT9 956 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 PAAF1Q9BRP4 392 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 C2orf40Q9H1Z8 148 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 PDZD7Q9H5P4 517 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 CACNG4Q9UBN1 327 aa10.37□□□□□ -0.75
CHD8-203ENST00000553283 ZFP37Q9Y6Q3 630 aaPredicted RBP10.37□□□□□ -0.75
CHD8-203ENST00000553283 EP300Q09472 2414 aaPredicted RBP10.37□□□□□ -0.75
CHD8-203ENST00000553283 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 CASTOR2A6NHX0 329 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 ACKR2O00590 384 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 PTGESO14684 152 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 KIF4AO95239 1232 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 THP07101 528 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD8-203ENST00000553283 FSHRP23945 695 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 MCM7P33993 719 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 NEK4P51957 841 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 ELAVL2Q12926 359 aaKnown RBP10.36□□□□□ -0.75
CHD8-203ENST00000553283 PRPF4BQ13523 1007 aaKnown RBP10.36□□□□□ -0.75
CHD8-203ENST00000553283 HTR4Q13639 388 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 SAFBQ15424 915 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD8-203ENST00000553283 NAB2Q15742 525 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 MAPK6Q16659 721 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 CEP57Q86XR8 500 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 PIK3R5Q8WYR1 880 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 BSNDQ8WZ55 320 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 CXCL16Q9H2A7 254 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 TBC1D17Q9HA65 648 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
CHD8-203ENST00000553283 FBXW11Q9UKB1 542 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 CA14Q9ULX7 337 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 WDR87Q6ZQQ6 2873 aa10.36□□□□□ -0.75
CHD8-203ENST00000553283 ARHGEF35A5YM69 484 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 RECQL4O94761 1208 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 PRKCBP05771 671 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 RFX1P22670 979 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 RPA1P27694 616 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 NAMPTP43490 491 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 FOXK2Q01167 660 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 ZNF174Q15697 407 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 PSMD5Q16401 504 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 PPM1LQ5SGD2 360 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 LIN9Q5TKA1 542 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
CHD8-203ENST00000553283 GRASPQ7Z6J2 395 aaPredicted RBP10.35□□□□□ -0.75
CHD8-203ENST00000553283 NOSTRINQ8IVI9 506 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 DEPTORQ8TB45 409 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 HASPINQ8TF76 798 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 ADPGKQ9BRR6 497 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 SEMA4AQ9H3S1 761 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 SLC2A4RGQ9NR83 387 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 CDH7Q9ULB5 785 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 USP20Q9Y2K6 914 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 NUMBLQ9Y6R0 609 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms