RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ATP9AO75110 1047 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 RPP40O75818 363 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 AKAP3O75969 853 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 CAVIN2O95810 425 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TOP3BO95985 862 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SOD2P04179 222 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 NTRK1P04629 796 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SPATA31D3P0C874 917 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 CCDC192P0DO97 292 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 MPLP40238 635 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SATB1Q01826 763 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 CREMQ03060 361 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 DGKKQ5KSL6 1271 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 AXDND1Q5T1B0 1012 aaPredicted RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 FAM160B1Q5W0V3 765 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 LARP1BQ659C4 914 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SPATA31D4Q6ZUB0 917 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF598Q86UK7 904 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 FAM228AQ86W67 206 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 PALB2Q86YC2 1186 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 NT5DC4Q86YG4 428 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SYNPOQ8N3V7 929 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 METTL13Q8N6R0 699 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ST13P5Q8NFI4 369 aaPredicted RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 URGCPQ8TCY9 931 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TMEM40Q8WWA1 233 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ZBTB10Q96DT7 871 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ZC3H10Q96K80 434 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 DMRTB1Q96MA1 342 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 OSMRQ99650 979 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 HNRNPABQ99729 332 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TMEM175Q9BSA9 504 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TRMT61BQ9BVS5 477 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 CCDC86Q9H6F5 360 aaKnown RBP5.86□□□□□ -1.47
CKAP4-203ENST00000553039 BRD9Q9H8M2 597 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TMEM9BQ9NQ34 198 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 TRPV5Q9NQA5 729 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 GDE1Q9NZC3 331 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 RAI2Q9Y5P3 530 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SPTA1P02549 2419 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 ATG2AQ2TAZ0 1938 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 MYH4Q9Y623 1939 aa5.86□□□□□ -1.47
CKAP4-203ENST00000553039 SHISA7A6NL88 538 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 KLRF2D3W0D1 207 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 OPLAHO14841 1288 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TGM5O43548 720 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF623O75123 536 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ATG13O75143 517 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 GPR32O75388 356 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 MYBP10242 640 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 PLA2G2AP14555 144 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 GLUD2P49448 558 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 NLRP11P59045 1033 aaKnown RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 DAB2P98082 770 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 FANCCQ00597 558 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 KCNC4Q03721 635 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 SCAPQ12770 1279 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 SRSF5Q13243 272 aaKnown RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 HNRNPDQ14103 355 aaKnown RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ELF2Q15723 593 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 CCDC6Q16204 474 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 UVSSAQ2YD98 709 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 LILRA6Q6PI73 481 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 RTL10Q7L3V2 364 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 GRASPQ7Z6J2 395 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 BPHLQ86WA6 291 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TMEM173Q86WV6 379 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TMEFF1Q8IYR6 380 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TRAPPC12Q8WVT3 735 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ELSPBP1Q96BH3 223 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 MSANTD3Q96H12 275 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 BBC3Q96PG8 261 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 MAP7D2Q96T17 732 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 FAM129BQ96TA1 746 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 SPSB2Q99619 263 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 KXD1Q9BQD3 176 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 SDF4Q9BRK5 362 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 EDEM2Q9BV94 578 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 COLEC11Q9BWP8 271 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 APOL6Q9BWW8 343 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 C1QTNF2Q9BXJ5 285 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 INO80BQ9C086 356 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 GBP3Q9H0R5 595 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 CHMP4BQ9H444 224 aaKnown RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ZFP14Q9HCL3 533 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 JPH1Q9HDC5 661 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TBC1D13Q9NVG8 400 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 FNIP2Q9P278 1114 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 SLC9A2Q9UBY0 812 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 PARP2Q9UGN5 583 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 CEP131Q9UPN4 1083 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
CKAP4-203ENST00000553039 USP9XQ93008 2570 aaPredicted RBP5.85□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF462Q96JM2 2506 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms