RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	SRF	P11831	508 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	GRIK3	Q13003	919 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	CALCRL	Q16602	461 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	USP41	Q3LFD5	358 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	RTP2	Q5QGT7	225 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	SLC27A1	Q6PCB7	646 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	GET4	Q7L5D6	327 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	HACE1	Q8IYU2	909 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	ADSSL1	Q8N142	457 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	GPR152	Q8TDT2	470 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	TTC12	Q9H892	705 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	TBC1D17	Q9HA65	648 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	PIDD1	Q9HB75	910 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	GPRC5C	Q9NQ84	441 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	ZDHHC7	Q9NXF8	308 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	FNIP2	Q9P278	1114 aa		13.96	□□□□□ -0.17
LETMD1-231	ENST00000551931	ZMYM2	Q9UBW7	1377 aa		13.96	□□□□□ -0.18
LETMD1-231	ENST00000551931		A0A1B0GUA9	196 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	POTEM	A6NI47	508 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	TTLL13P	A6NNM8	815 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	STK25	O00506	426 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	USO1	O60763	962 aa	Known RBP	13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	LARGE1	O95461	756 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	C1R	P00736	705 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	LAMP2	P13473	410 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	TXK	P42681	527 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	HTR4	Q13639	388 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	MAEA	Q7L5Y9	396 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	GPR65	Q8IYL9	337 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	NECAB1	Q8N987	351 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	HASPIN	Q8TF76	798 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	PRKD2	Q9BZL6	878 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	CXCL16	Q9H2A7	254 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	PARP2	Q9UGN5	583 aa		13.95	□□□□□ -0.18
LETMD1-231	ENST00000551931	MYH11	P35749	1972 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	LRRIQ4	A6NIV6	560 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	BTBD18	B2RXH4	712 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	ANHX	E9PGG2	379 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	ZMYND10	O75800	440 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	KIF4A	O95239	1232 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	FOSB	P53539	338 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	WASF1	Q92558	559 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	NXPE3	Q969Y0	559 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	CCDC43	Q96MW1	224 aa	Known RBP	13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	MTMR9	Q96QG7	549 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	BRMS1	Q9HCU9	246 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	NUMBL	Q9Y6R0	609 aa		13.94	□□□□□ -0.18
LETMD1-231	ENST00000551931	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.93	□□□□□ -0.18	2e-7	■■■■■ 129.2
LETMD1-231	ENST00000551931	CASTOR2	A6NHX0	329 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	PTGES	O14684	152 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	NEMF	O60524	1076 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	TADA2A	O75478	443 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	DCN	P07585	359 aa	Known RBP	13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	SPATA31C1	P0DKV0	1188 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	RFX1	P22670	979 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	NTHL1	P78549	312 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	TUSC3	Q13454	348 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	ME3	Q16798	604 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	SPECC1	Q5M775	1068 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	CLSTN3	Q9BQT9	956 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	RPP25	Q9BUL9	199 aa	Known RBP	13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	TMEM60	Q9H2L4	133 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	PDZD7	Q9H5P4	517 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	ARHGEF3	Q9NR81	526 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	DLGAP2	Q9P1A6	1054 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	FBXW11	Q9UKB1	542 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	USP20	Q9Y2K6	914 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931		R4GN57	208 aa		13.93	□□□□□ -0.18
LETMD1-231	ENST00000551931	GPR179	Q6PRD1	2367 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	ADAM12	O43184	909 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	JAK2	O60674	1132 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	MED24	O75448	989 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	RECQL4	O94761	1208 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	EDN1	P05305	212 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	FSHR	P23945	695 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	FOXK2	Q01167	660 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	CREM	Q03060	361 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	NAB2	Q15742	525 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	FAM171A1	Q5VUB5	890 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	PHLDB3	Q6NSJ2	640 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	DIS3L2	Q8IYB7	885 aa	Known RBP	13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	NSUN7	Q8NE18	718 aa	Known RBP	13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	LNX1	Q8TBB1	728 aa	Predicted RBP	13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	PIK3R5	Q8WYR1	880 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	BSND	Q8WZ55	320 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	FGF14	Q92915	247 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	GTF3C6	Q969F1	213 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	PRIMPOL	Q96LW4	560 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	FZD8	Q9H461	694 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	SLC2A4RG	Q9NR83	387 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	SNTG2	Q9NY99	539 aa		13.92	□□□□□ -0.18
LETMD1-231	ENST00000551931	XRCC6	P12956	609 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
LETMD1-231	ENST00000551931	GLUL	P15104	373 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 357.2 ms