RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RTP2Q5QGT7 225 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 IGSF9Q9P2J2 1179 aa19.83■□□□□ 0.77
PRPF40B-215ENST00000551418 DMDP11532 3685 aa19.83■□□□□ 0.76
PRPF40B-215ENST00000551418 CASTOR2A6NHX0 329 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 PTGESO14684 152 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 NR1I2O75469 434 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 TADA2AO75478 443 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 PAPLNO95428 1278 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 GRIK3Q13003 919 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 CCDC43Q96MW1 224 aaKnown RBP19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 FZD8Q9H461 694 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 PDZD7Q9H5P4 517 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 PIDD1Q9HB75 910 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 SNTG2Q9NY99 539 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 EPS15L1Q9UBC2 864 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 CA14Q9ULX7 337 aa19.82■□□□□ 0.76
PRPF40B-215ENST00000551418 TRIP11Q15643 1979 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 VWA8A3KMH1 1905 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 ADAM12O43184 909 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 NTHL1P78549 312 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 EEF1DP3Q658K8 133 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 NOSTRINQ8IVI9 506 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 CCDC105Q8IYK2 499 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 DTWD2Q8NBA8 298 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 RPP25Q9BUL9 199 aaKnown RBP19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 RHOBTB2Q9BYZ6 727 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 PRKD2Q9BZL6 878 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 PLEKHA4Q9H4M7 779 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 FNIP2Q9P278 1114 aa19.81■□□□□ 0.76
PRPF40B-215ENST00000551418 EIF5BO60841 1220 aaKnown RBP19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 KIF4AO95239 1232 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 LAMP2P13473 410 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 LIG1P18858 919 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 NEK4P51957 841 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 HSP90AA2PQ14568 343 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 ZNF174Q15697 407 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 NAB2Q15742 525 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 CDCA2Q69YH5 1023 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 CYP26C1Q6V0L0 522 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 GET4Q7L5D6 327 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 HACE1Q8IYU2 909 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 HDAC7Q8WUI4 952 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 CLSTN3Q9BQT9 956 aa19.8■□□□□ 0.76
PRPF40B-215ENST00000551418 COL4A3Q01955 1670 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 STK25O00506 426 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 ZMYND10O75800 440 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 SEC24BO95487 1268 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 TUSC3Q13454 348 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 ANGPT1Q15389 498 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 ECM1Q16610 540 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 FAM187BQ17R55 369 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 FAM171A1Q5VUB5 890 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 CEP57Q86XR8 500 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 LNX1Q8TBB1 728 aaPredicted RBP19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 GPR152Q8TDT2 470 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 STAMQ92783 540 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 KIFC3Q9BVG8 833 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 TUFT1Q9NNX1 390 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 PRMT7Q9NVM4 692 aaPredicted RBP19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 WNT16Q9UBV4 365 aa19.79■□□□□ 0.76
PRPF40B-215ENST00000551418 RECQL4O94761 1208 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 TRIM29Q14134 588 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 PADI6Q6TGC4 694 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 GRASPQ7Z6J2 395 aaPredicted RBP19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 GPR65Q8IYL9 337 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 SNX27Q96L92 541 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 NACC1Q96RE7 527 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 POLR3CQ9BUI4 534 aaPredicted RBP19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 CCDC113Q9H0I3 377 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 ZDHHC7Q9NXF8 308 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 DPP7Q9UHL4 492 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 NOTCH4Q99466 2003 aa19.78■□□□□ 0.76
PRPF40B-215ENST00000551418 ANHXE9PGG2 379 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 PRKCBP05771 671 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 SRFP11831 508 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 CYP11B2P19099 503 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 PRPF4BQ13523 1007 aaKnown RBP19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 HTR4Q13639 388 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 ZBTB8OSQ8IWT0 167 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 MCPH1Q8NEM0 835 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 PRIMPOLQ96LW4 560 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 RTP3Q9BQQ7 232 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 TTPALQ9BTX7 342 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 TBC1D17Q9HA65 648 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 FBXW11Q9UKB1 542 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 GDAQ9Y2T3 454 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 NUMBLQ9Y6R0 609 aa19.77■□□□□ 0.76
PRPF40B-215ENST00000551418 SF3B1O75533 1304 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 MYH15Q9Y2K3 1946 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 ZMYM2Q9UBW7 1377 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 C1RP00736 705 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 THP07101 528 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 NBR1Q14596 966 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 NT5DC1Q5TFE4 455 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 ELMSAN1Q6PJG2 1045 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 CD300LGQ6UXG3 332 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms