RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 MYO7AQ13402 2215 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 FRMD3A2A2Y4 597 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 NT5C1B-RDH14C9J2C7 533 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 NR1I2O75469 434 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 CSPG5O95196 566 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 ALDH2P05091 517 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 COL9A1P20849 921 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 ERVFC1P60507 584 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 NOLC1Q14978 699 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 DHX58Q96C10 678 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 PABPC5Q96DU9 382 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 TCF25Q9BQ70 676 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 TOPORSQ9NS56 1045 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 ANKFY1Q9P2R3 1169 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 GDAQ9Y2T3 454 aa16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-211ENST00000551063 PTGESO14684 152 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 NRP1O14786 923 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 YARSP54577 528 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 AMPD3Q01432 767 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 MCL1Q07820 350 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 HYAL1Q12794 435 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 BMS1Q14692 1282 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 ADALQ6DHV7 355 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 CEP120Q8N960 986 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 BICD1Q96G01 975 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 CDCA3Q99618 268 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
PRPF40B-211ENST00000551063 BRWD1Q9NSI6 2320 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 CLDN3O15551 220 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 PPP1R37O75864 691 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 OR1G1P47890 313 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 LIG4P49917 911 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 TUSC3Q13454 348 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 ALCAMQ13740 583 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 XKR4Q5GH76 650 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 ZNF720Q7Z2F6 126 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 TMC7Q7Z402 723 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 ZBTB33Q86T24 672 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 TRIM9Q9C026 710 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 KCNH3Q9ULD8 1083 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 PCDHGC5Q9Y5F6 944 aa16.87■□□□□ 0.29
PRPF40B-211ENST00000551063 THP07101 528 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 CTSAP10619 480 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 HARSP12081 509 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 IDEP14735 1019 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 CMA1P23946 247 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 KYAT1Q16773 422 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 CTC1Q2NKJ3 1217 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 LEXMQ3ZCV2 418 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 HERC4Q5GLZ8 1057 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 ZBTB45Q96K62 511 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 SNX27Q96L92 541 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 ACAP3Q96P50 834 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 COLEC11Q9BWP8 271 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 STRA6Q9BX79 667 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 TLE6Q9H808 572 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 MRPL44Q9H9J2 332 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 IRAK3Q9Y616 596 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 MUC3AQ02505 3323 aa16.86■□□□□ 0.29
PRPF40B-211ENST00000551063 KCNA5P22460 613 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 MATR3P43243 847 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 NRIP1P48552 1158 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 NAB2Q15742 525 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 DUSP6Q16828 381 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 MRPL43Q8N983 215 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 C7orf25Q9BPX7 421 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 CLDND1Q9NY35 253 aa16.85■□□□□ 0.29
PRPF40B-211ENST00000551063 CNTN3Q9P232 1028 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms