RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PAAF1Q9BRP4 392 aa24■■□□□ 1.43
SMARCC2-210ENST00000550519 CACNG4Q9UBN1 327 aa24■■□□□ 1.43
SMARCC2-210ENST00000550519 FBXL21Q9UKT6 434 aa24■■□□□ 1.43
SMARCC2-210ENST00000550519 TDRD15B5MCY1 1934 aaKnown RBP24■■□□□ 1.43
SMARCC2-210ENST00000550519 CFAP54Q96N23 3096 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 NARSO43776 548 aaKnown RBP23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 TADA2AO75478 443 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 RPL17P18621 184 aaKnown RBP23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 CREMQ03060 361 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 SIX5Q8N196 739 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 BSNDQ8WZ55 320 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 NXPE3Q969Y0 559 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 PRKD2Q9BZL6 878 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 C2orf40Q9H1Z8 148 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 PDZD7Q9H5P4 517 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 WNT16Q9UBV4 365 aa23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 SF3B1O75533 1304 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMARCC2-210ENST00000550519 RIF1Q5UIP0 2472 aaKnown RBP23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 PTGESO14684 152 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 N4BP3O15049 544 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 RPA1P27694 616 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 SAFBQ15424 915 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 RTP2Q5QGT7 225 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 POTEGQ6S5H5 508 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 ASCL5Q7RTU5 278 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 GLYCTKQ8IVS8 523 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 SLC44A3Q8N4M1 653 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 RTP3Q9BQQ7 232 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 PIDD1Q9HB75 910 aa23.98■■□□□ 1.43
SMARCC2-210ENST00000550519 ZMYND10O75800 440 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 NEFLP07196 543 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 CYP11B2P19099 503 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 GUCY1B3Q02153 619 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 MAPK6Q16659 721 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 PADI6Q6TGC4 694 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 PRSS55Q6UWB4 352 aaPredicted RBP23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 CCDC105Q8IYK2 499 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 CCDC113Q9H0I3 377 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 SNTG2Q9NY99 539 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 MYO15AQ9UKN7 3530 aa23.97■■□□□ 1.43
SMARCC2-210ENST00000550519 CASTOR2A6NHX0 329 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 ACKR2O00590 384 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 KIF4AO95239 1232 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 THP07101 528 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 ORC2Q13416 577 aaPredicted RBP23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 PRPF4BQ13523 1007 aaKnown RBP23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 NAB2Q15742 525 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 ERMNQ8TAM6 284 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 PIK3R5Q8WYR1 880 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 CLSTN3Q9BQT9 956 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 TTPALQ9BTX7 342 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 CXCL16Q9H2A7 254 aa23.96■■□□□ 1.43
SMARCC2-210ENST00000550519 KRBA1A5PL33 1030 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 PRR23AA6NEV1 266 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 RECQL4O94761 1208 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 EDN1P05305 212 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 PRKCBP05771 671 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 CFHP08603 1231 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 OR52Z1P0C646 297 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 LAMP2P13473 410 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 MUTP22033 750 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 NAMPTP43490 491 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 ZNF174Q15697 407 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 NOSTRINQ8IVI9 506 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 LNX1Q8TBB1 728 aaPredicted RBP23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 HASPINQ8TF76 798 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 USP20Q9Y2K6 914 aa23.95■■□□□ 1.42
SMARCC2-210ENST00000550519 ARHGEF35A5YM69 484 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 ANHXE9PGG2 379 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 SRFP11831 508 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 FAM171A1Q5VUB5 890 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 DTWD2Q8NBA8 298 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 C8orf76Q96K31 380 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 ADPGKQ9BRR6 497 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 FOXP1Q9H334 677 aaPredicted RBP23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 FBXW11Q9UKB1 542 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 DOCK8Q8NF50 2099 aa23.94■■□□□ 1.42
SMARCC2-210ENST00000550519 EIF5BO60841 1220 aaKnown RBP23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 PPP2R5AQ15172 486 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 TMEM132AQ24JP5 1023 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 EEF1DP3Q658K8 133 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 GET4Q7L5D6 327 aaPredicted RBP23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 FRMD5Q7Z6J6 570 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 DEPTORQ8TB45 409 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 LIMCH1Q9UPQ0 1083 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 FAM186AA6NE01 2351 aa23.93■■□□□ 1.42
SMARCC2-210ENST00000550519 MTCL1Q9Y4B5 1905 aaKnown RBP23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 VPS13AQ96RL7 3174 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 ELAVL2Q12926 359 aaKnown RBP23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 HTR4Q13639 388 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 ANGPT1Q15389 498 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 PSMD5Q16401 504 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 ECM1Q16610 540 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 CEP57Q86XR8 500 aa23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 LLPHQ9BRT6 129 aaKnown RBP23.92■■□□□ 1.42
SMARCC2-210ENST00000550519 SEC24BO95487 1268 aa23.91■■□□□ 1.42
SMARCC2-210ENST00000550519 HNRNPA1P09651 372 aaKnown RBP eCLIP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms