RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 FAM167AQ96KS9 214 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 RPS6KC1Q96S38 1066 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
LETMD1-223ENST00000550442 SYT11Q9BT88 431 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 CARD9Q9H257 536 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 MLXIPQ9HAP2 919 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 ATP6V0A4Q9HBG4 840 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 KMT5AQ9NQR1 393 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 NRBP2Q9NSY0 501 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 CYP39A1Q9NYL5 469 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
LETMD1-223ENST00000550442 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
LETMD1-223ENST00000550442 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 PGRMC1O00264 195 aaKnown RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 NKRFO15226 690 aaKnown RBP eCLIP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 RTN2O75298 545 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 PIGRP01833 764 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 COL6A1P12109 1028 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 KCNA2P16389 499 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 SLC26A2P50443 739 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 MXI1P50539 228 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 CYP2J2P51589 502 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 CLDN10P78369 228 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 POU5F1Q01860 360 aaKnown RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 GCNT1Q02742 428 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 TRIM32Q13049 653 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 ABHD15Q6UXT9 468 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 CROCCP2Q86T23 111 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 RIOX2Q8IUF8 465 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 USP38Q8NB14 1042 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 LMO3Q8TAP4 145 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 AENQ8WTP8 325 aaKnown RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 AGPAT1Q99943 283 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 GDF3Q9NR23 364 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.74□□□□□ -0.37
LETMD1-223ENST00000550442 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 STYXL1Q9Y6J8 313 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 PTPRFP10586 1907 aa12.74□□□□□ -0.37
LETMD1-223ENST00000550442 CDH23Q9H251 3354 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 DDX3XO00571 662 aaKnown RBP eCLIP12.73□□□□□ -0.37
LETMD1-223ENST00000550442 SASH3O75995 380 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 MYBL1P10243 752 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 OAS2P29728 719 aaKnown RBP12.73□□□□□ -0.37
LETMD1-223ENST00000550442 NPTX2P47972 431 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 EFNA5P52803 228 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 PEX3P56589 373 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 GPC5P78333 572 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 ARID5AQ03989 594 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 KCNA1Q09470 495 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 STRN3Q13033 797 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 SURF1Q15526 300 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
LETMD1-223ENST00000550442 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 FAM160B1Q5W0V3 765 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 UBL4BQ8N7F7 174 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 FBXL13Q8NEE6 735 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 LRRC45Q96CN5 670 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 C1QTNF1Q9BXJ1 281 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 CYP26B1Q9NR63 512 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 PNMA3Q9UL41 463 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
LETMD1-223ENST00000550442 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-223ENST00000550442 MAFBQ9Y5Q3 323 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-223ENST00000550442 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 PDE2AO00408 941 aaPredicted RBP12.72□□□□□ -0.37
LETMD1-223ENST00000550442 EXTL3O43909 919 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 SRGAP2O75044 1071 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 ERLIN2O94905 339 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
LETMD1-223ENST00000550442 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 ACTN1P12814 892 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
LETMD1-223ENST00000550442 CYP2C19P33261 490 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 NAMPTP43490 491 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 GALCP54803 685 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 MTMR3Q13615 1198 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 SHHQ15465 462 aa12.72□□□□□ -0.37
LETMD1-223ENST00000550442 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms