RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PKP1Q13835 747 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 MPZL3Q6UWV2 235 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 VN1R3Q9BXE9 311 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 MIOSQ9NXC5 875 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 C2orf71A6NGG8 1288 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 K7ENM7 598 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 CTSAP10619 480 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 MCF2P10911 925 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 GRM5P41594 1212 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 TUSC3Q13454 348 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 GIT2Q14161 759 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 CLUL1Q15846 466 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 ATL3Q6DD88 541 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 ZPBP2Q6X784 338 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 HAUS6Q7Z4H7 955 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 MYCT1Q8N699 235 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 MRPL43Q8N983 215 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 KCNG4Q8TDN1 519 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 NECAB3Q96P71 396 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 CCDC94Q9BW85 323 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 ZHX3Q9H4I2 956 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 TOPORSQ9NS56 1045 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 MARCH5Q9NX47 278 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 ANKFY1Q9P2R3 1169 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 CD207Q9UJ71 328 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 TCHHQ07283 1943 aa18.9■□□□□ 0.62
CHMP1A-208ENST00000550102 PLXNA3P51805 1871 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 GRXCR2A6NFK2 248 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 PTGESO14684 152 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 TOM1L1O75674 476 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 THP07101 528 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 PROZP22891 400 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 ABCD1P33897 745 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 YARSP54577 528 aaKnown RBP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 SMAD4Q13485 552 aaKnown RBP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 NOLC1Q14978 699 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 VN1R2Q8NFZ6 395 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 KCNN1Q92952 543 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 BICD1Q96G01 975 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 TCHPQ9BT92 498 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 COLEC11Q9BWP8 271 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 BARX2Q9UMQ3 279 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 IRAK3Q9Y616 596 aa18.89■□□□□ 0.61
CHMP1A-208ENST00000550102 C5orf42Q9H799 3197 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 TNFRSF10AO00220 468 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 ABLIM1O14639 778 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 CUTAO60888 179 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 BRD1O95696 1058 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 CXCL14O95715 111 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 URODP06132 367 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 HARSP12081 509 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 PTPN14Q15678 1187 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 SV2BQ7L1I2 683 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 CEP120Q8N960 986 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 TMEM87AQ8NBN3 555 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 AUTS2Q8WXX7 1259 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 MSLNLQ96KJ4 702 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 CLEC1BQ9P126 229 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 VWA8A3KMH1 1905 aa18.88■□□□□ 0.61
CHMP1A-208ENST00000550102 A0A087X0B3 334 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 TRAK2O60296 914 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 SOD2P04179 222 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 IL9P15248 144 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 ANK1P16157 1881 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 COASYQ13057 564 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 HSP90AA2PQ14568 343 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 LLGL2Q6P1M3 1020 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 PDILTQ8N807 584 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 SMRP1Q8NCR6 262 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 CFAP45Q9UL16 551 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 TBX20Q9UMR3 447 aa18.87■□□□□ 0.61
CHMP1A-208ENST00000550102 SF3B1O75533 1304 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 F8W810 466 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 CLDN3O15551 220 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 MBTPS2O43462 519 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 GLUD2P49448 558 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 LIG4P49917 911 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 OSTNP61366 133 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 RBM10P98175 930 aaKnown RBP18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 KCNC3Q14003 757 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 BECN1Q14457 450 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 TMEM184AQ6ZMB5 413 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 DYMQ7RTS9 669 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 SFR1Q86XK3 245 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 RNF168Q8IYW5 571 aaPredicted RBP18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 DDX12PQ92771 950 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 SNX27Q96L92 541 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 MRPL17Q9NRX2 175 aaKnown RBP18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 CACNG4Q9UBN1 327 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 SEL1LQ9UBV2 794 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms