RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 B3GNT9Q6UX72 402 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 PRR23BQ6ZRT6 265 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CELF5Q8N6W0 485 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 RNF149Q8NC42 400 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 GSTCDQ8NEC7 633 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CPB2Q96IY4 423 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CEP170P1Q96L14 293 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CLSTN3Q9BQT9 956 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 PLA2G2FQ9BZM2 168 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 ANO2Q9NQ90 1003 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 HCFC1R1Q9NWW0 138 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 CACNG4Q9UBN1 327 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 MRPS17Q9Y2R5 130 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 XYLBO75191 536 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 TDP2O95551 362 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 RETP07949 1114 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 NCBP1Q09161 790 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 Q4G0T1 1027 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 NPAS3Q8IXF0 933 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 LNX1Q8TBB1 728 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 HASPINQ8TF76 798 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 ING5Q8WYH8 240 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 MCRS1Q96EZ8 462 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 PAAF1Q9BRP4 392 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 TRIM6Q9C030 488 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 SEMA4GQ9NTN9 838 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 NDRG2Q9UN36 371 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 GIT1Q9Y2X7 761 aa12.04□□□□□ -0.48
TRAFD1-206ENST00000549358 MIA3Q5JRA6 1907 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 SHISA7A6NL88 538 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 EML1O00423 815 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 ASAP2O43150 1006 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 ADAM12O43184 909 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 GDF9O60383 454 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 ECI2O75521 394 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 TDGF1P13385 188 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 AXLP30530 894 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 QARSP47897 775 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 FGD1P98174 961 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 COL9A2Q14055 689 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 PSMD5Q16401 504 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 PABPC1LQ4VXU2 614 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 AXDND1Q5T1B0 1012 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 FAM171A1Q5VUB5 890 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 PRR23CQ6ZRP0 262 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 TCP11Q8WWU5 503 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 TTPALQ9BTX7 342 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 NXF3Q9H4D5 531 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 ANGPTL2Q9UKU9 493 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■■■■■ 31.2
TRAFD1-206ENST00000549358 MYH15Q9Y2K3 1946 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
TRAFD1-206ENST00000549358 DOCK8Q8NF50 2099 aa12.02□□□□□ -0.48
TRAFD1-206ENST00000549358 CYP3A7-CYP3A51PA0A087WV96 503 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 LRP3O75074 770 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 CYP3A7P24462 503 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 HOXA9P31269 272 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 RFC5P40937 340 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 RCAN1P53805 252 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 DMWDQ09019 674 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 GRIK3Q13003 919 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 PCBP1Q15365 356 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 CSRP2Q16527 193 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 TANGO2Q6ICL3 276 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 CDR2LQ86X02 465 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 CCDC148Q8NFR7 591 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 ETNPPLQ8TBG4 499 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 CCDC51Q96ER9 411 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 LMAN1LQ9HAT1 526 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 WRAP73Q9P2S5 460 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 PARP2Q9UGN5 583 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 KCNH3Q9ULD8 1083 aa12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-206ENST00000549358 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 ACACBO00763 2458 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms