RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
SMARCD1-206ENST00000549274 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 CSDE1O75534 798 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 ITGA4P13612 1032 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FGFR4P22455 802 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 EEF1GP26641 437 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 HOXD13P35453 343 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 CYP2J2P51589 502 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 KCNA1Q09470 495 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 SNRNP35Q16560 246 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 CEP135Q66GS9 1140 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 ANKRD40Q6AI12 368 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FRMD5Q7Z6J6 570 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 MRPL10Q7Z7H8 261 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FAM186BQ8IYM0 893 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 PHOSPHO2Q8TCD6 241 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 URGCPQ8TCY9 931 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 BADQ92934 168 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FNBP1Q96RU3 617 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 RPS6KC1Q96S38 1066 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 FGFBP2Q9BYJ0 223 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 SEMA6BQ9H3T3 888 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 ASB7Q9H672 318 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 DERAQ9Y315 318 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 PCDHB7Q9Y5E2 793 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 PCDHB2Q9Y5E7 798 aa10.63□□□□□ -0.71
SMARCD1-206ENST00000549274 C9IYK1 514 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ABLIM1O14639 778 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 CLIC2O15247 247 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 N4BP1O75113 896 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 TPM3P06753 285 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 HARSP12081 509 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 PAX3P23760 479 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 MARSP56192 900 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 FAM189BP81408 668 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 CETN1Q12798 172 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 CCDC40Q4G0X9 1142 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 GLB1LQ6UWU2 654 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ECHDC2Q86YB7 292 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 BRSK2Q8IWQ3 736 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 CACTINQ8WUQ7 758 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 HERVK_113Q902F9 699 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 CBWD1Q9BRT8 395 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 FAM213AQ9BRX8 229 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 SRRTQ9BXP5 876 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 TMX1Q9H3N1 280 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 RBAKQ9NYW8 714 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ARMCX3Q9UH62 379 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 R3HCC1Q9Y3T6 440 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 NFE2L3Q9Y4A8 694 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 IPPQ9Y573 584 aa10.62□□□□□ -0.71
SMARCD1-206ENST00000549274 ENPP3O14638 875 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 ADSSP30520 456 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 GTF2H1P32780 548 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 STX17P56962 302 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 GPNMBQ14956 572 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 PSMD6Q15008 389 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 C11orf57Q6ZUT1 292 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 THNSL1Q8IYQ7 743 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 AOPEPQ8N6M6 819 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 PCIF1Q9H4Z3 704 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 RSAD1Q9HA92 442 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 CPSF3Q9UKF6 684 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 ZMYND8Q9ULU4 1186 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 C2CD2Q9Y426 696 aa10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 PDCD11Q14690 1871 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-206ENST00000549274 TDRD15B5MCY1 1934 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 PDE4DIPQ5VU43 2346 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 TRIM49BA6NDI0 452 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ZBBXA8MT70 800 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 INPPL1O15357 1258 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 MGEA5O60502 916 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 RECQL4O94761 1208 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 EDN1P05305 212 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ADRB2P07550 413 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 SYN1P17600 705 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ITGB8P26012 769 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 MTIF2P46199 727 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 VAMP7P51809 220 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 MLLT1Q03111 559 aaPredicted RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 CYP24A1Q07973 514 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 BFSP1Q12934 665 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 FILIP1LQ4L180 1135 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 UBXN11Q5T124 520 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 WDR49Q8IV35 697 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms