RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 ELMSAN1Q6PJG2 1045 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 MAEAQ7L5Y9 396 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 PRKD2Q9BZL6 878 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 FOXQ1Q9C009 403 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 PLEKHA4Q9H4M7 779 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 ZDHHC7Q9NXF8 308 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 DLGAP2Q9P1A6 1054 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 ORC3Q9UBD5 711 aaPredicted RBP18.27■□□□□ 0.52
SSH1-208ENST00000548522 PARP2Q9UGN5 583 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 DPP7Q9UHL4 492 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 USP20Q9Y2K6 914 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 GPR179Q6PRD1 2367 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 A0A1B0GUA9 196 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 ANHXE9PGG2 379 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 LRRN2O75325 713 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 KIF4AO95239 1232 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 GLULP15104 373 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 XBP1P17861 261 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 KRT2P35908 639 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 ID4P47928 161 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 FOSBP53539 338 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 POU5F1BQ06416 359 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SSH1-208ENST00000548522 HSP90AA2PQ14568 343 aaPredicted RBP18.26■□□□□ 0.51
SSH1-208ENST00000548522 CALCRLQ16602 461 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
SSH1-208ENST00000548522 NFKBIZQ9BYH8 718 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSH1-208ENST00000548522 ANKEF1Q9NU02 776 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 FNIP2Q9P278 1114 aa18.26■□□□□ 0.51
SSH1-208ENST00000548522 POTEMA6NI47 508 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 LRRIQ4A6NIV6 560 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 PTGESO14684 152 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 ADAM12O43184 909 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 ZMYND10O75800 440 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 BAG4O95429 457 aaKnown RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 LARGE1O95461 756 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 EDN1P05305 212 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 IGFBP6P24592 240 aaPredicted RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 FOXK2Q01167 660 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 GRASPQ7Z6J2 395 aaPredicted RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 HACE1Q8IYU2 909 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 NECAB1Q8N987 351 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 FGF14Q92915 247 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.25■□□□□ 0.51
SSH1-208ENST00000548522 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
SSH1-208ENST00000548522 TDRD15B5MCY1 1934 aaKnown RBP18.25■□□□□ 0.51
SSH1-208ENST00000548522 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■■■■ 155.1
SSH1-208ENST00000548522 TADA2AO75478 443 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 FSHRP23945 695 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 TXKP42681 527 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 PARM1Q6UWI2 310 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 BSNDQ8WZ55 320 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 NXPE3Q969Y0 559 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 CLSTN3Q9BQT9 956 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 OTOGLQ3ZCN5 2332 aa18.24■□□□□ 0.51
SSH1-208ENST00000548522 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 NEMFO60524 1076 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 LMNAP02545 664 aaKnown RBP18.23■□□□□ 0.51
SSH1-208ENST00000548522 TUSC3Q13454 348 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 CDCA2Q69YH5 1023 aaPredicted RBP18.23■□□□□ 0.51
SSH1-208ENST00000548522 PHLDB3Q6NSJ2 640 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 DCLRE1AQ6PJP8 1040 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 CEP57Q86XR8 500 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 LNX1Q8TBB1 728 aaPredicted RBP18.23■□□□□ 0.51
SSH1-208ENST00000548522 TMEM60Q9H2L4 133 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 PDZD7Q9H5P4 517 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 SLC2A4RGQ9NR83 387 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 SNTG2Q9NY99 539 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 SIT1Q9Y3P8 196 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 NCOR2Q9Y618 2525 aa18.23■□□□□ 0.51
SSH1-208ENST00000548522 CEP250Q9BV73 2442 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 BTBD18B2RXH4 712 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 CCL16O15467 120 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 RECQL4O94761 1208 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 C1RP00736 705 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 C8AP07357 584 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 SPATA31C1P0DKV0 1188 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 GPC5P78333 572 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 NAB2Q15742 525 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 PSMD5Q16401 504 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 PJA1Q8NG27 643 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 ITFG1Q8TB96 612 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 RMDN1Q96DB5 314 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 TTPALQ9BTX7 342 aa18.22■□□□□ 0.51
SSH1-208ENST00000548522 JAK2O60674 1132 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 MED24O75448 989 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms