RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 EFCAB8A8MWE9 144 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 LYPLA2O95372 231 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 SPATA31C1P0DKV0 1188 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 TMOD1P28289 359 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 HNRNPH3P31942 346 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 YWHABP31946 246 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 CYLC1P35663 651 aaPredicted RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 MARSP56192 900 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 NFX1Q12986 1120 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 EDRF1Q3B7T1 1238 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 KCNK18Q7Z418 384 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 GDPD5Q8WTR4 605 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 TGS1Q96RS0 853 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 YME1L1Q96TA2 773 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 TTYH3Q9C0H2 523 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 NUCKS1Q9H1E3 243 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 ZSWIM4Q9H7M6 989 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 CUL9Q8IWT3 2517 aa18.82■□□□□ 0.6
RBFOX1-207ENST00000547338 CSDE1O75534 798 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 DGKIO75912 1065 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 DARSP14868 501 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 IGFBP4P22692 258 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 EIF4BP23588 611 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 GATMP50440 423 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 PPP2R3AQ06190 1150 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 ECM1Q16610 540 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 MIIPQ5JXC2 388 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 HAUS4Q9H6D7 363 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 XPNPEP1Q9NQW7 623 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 PRDM6Q9NQX0 595 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 KIAA1671Q9BY89 1806 aa18.81■□□□□ 0.6
RBFOX1-207ENST00000547338 SPTBN5Q9NRC6 3674 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 C9IYK1 514 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 PES1O00541 588 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 URI1O94763 535 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 CYP11B2P19099 503 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 FGFR4P22455 802 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 SLC12A3P55017 1021 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 ZCWPW2Q504Y3 356 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 ARHGAP29Q52LW3 1261 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 ZC3H3Q8IXZ2 948 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 EHBP1Q8NDI1 1231 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 MNS1Q8NEH6 495 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 CEP170P1Q96L14 293 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 ADAM2Q99965 735 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 CCDC94Q9BW85 323 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 NDST4Q9H3R1 872 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 RGS18Q9NS28 235 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 ADGRA3Q8IWK6 1321 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 RALGAPA2Q2PPJ7 1873 aa18.8■□□□□ 0.6
RBFOX1-207ENST00000547338 GPR182O15218 404 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 MED24O75448 989 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 NDUFA10O95299 355 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 CATSPER3Q86XQ3 398 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 NPAS4Q8IUM7 802 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 TXLNBQ8N3L3 684 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 SLC17A8Q8NDX2 589 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 SUCLA2Q9P2R7 463 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 COL4A3BPQ9Y5P4 624 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 VCANP13611 3396 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 FNDC1Q4ZHG4 1894 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 ATG2AQ2TAZ0 1938 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 A0A087WZ62 844 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 E9PMD0 336 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 IPO7O95373 1038 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 EYA4O95677 639 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 KRT18P05783 430 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 GAP43P17677 238 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 FAM189BP81408 668 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 CCDC85BQ15834 202 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 EPC2Q52LR7 807 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 XKR9Q5GH70 373 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 HERC4Q5GLZ8 1057 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 NEK9Q8TD19 979 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 UBXN4Q92575 508 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 TMEM143Q96AN5 459 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 FDXACB1Q9BRP7 624 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 IFT122Q9HBG6 1241 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
RBFOX1-207ENST00000547338 XIRP2A4UGR9 3374 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 BRWD1Q9NSI6 2320 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 EIF3CLB5ME19 914 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 RFC5P40937 340 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 MTF1Q14872 753 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 EMC2Q15006 297 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 PIGOQ8TEQ8 1089 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 PRPF31Q8WWY3 499 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 NLRP7Q8WX94 980 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 PPM1EQ8WY54 764 aa18.78■□□□□ 0.6
RBFOX1-207ENST00000547338 CLP1Q92989 425 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms