RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 SNTG2Q9NY99 539 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 DNM3Q9UQ16 869 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.37□□□□□ -0.59
BEST3-208ENST00000547208 VWA3AA6NCI4 1184 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 RECQL4O94761 1208 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 GUCY2CP25092 1073 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 CA8P35219 290 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 NPTX2P47972 431 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 CLCN4P51793 760 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 EFNA5P52803 228 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 ITIH3Q06033 890 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 C12orf76Q8N812 135 aaPredicted RBP11.36□□□□□ -0.59
BEST3-208ENST00000547208 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 RABGGTAQ92696 567 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 SNX27Q96L92 541 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 RPS6KC1Q96S38 1066 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 BACH2Q9BYV9 841 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 GPR62Q9BZJ7 368 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 DZANK1Q9NVP4 752 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 ARHGAP28Q9P2N2 729 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 PARP2Q9UGN5 583 aa11.36□□□□□ -0.59
BEST3-208ENST00000547208 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 DMDP11532 3685 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 K7ERI5 159 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 ABLIM1O14639 778 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 LIG1P18858 919 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 GLUD2P49448 558 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 PEX3P56589 373 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 DSG1Q02413 1049 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 TUSC3Q13454 348 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 DCAF4L1Q3SXM0 396 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 RARS2Q5T160 578 aaKnown RBP11.35□□□□□ -0.59
BEST3-208ENST00000547208 ATF7IP2Q5U623 682 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 FUT10Q6P4F1 479 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 SYT2Q8N9I0 419 aaPredicted RBP11.35□□□□□ -0.59
BEST3-208ENST00000547208 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 B3GALT6Q96L58 329 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
BEST3-208ENST00000547208 EMILIN2Q9BXX0 1053 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 PTPRHQ9HD43 1115 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 MRPL17Q9NRX2 175 aaKnown RBP11.35□□□□□ -0.59
BEST3-208ENST00000547208 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 MYO15AQ9UKN7 3530 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 NOTCH4Q99466 2003 aa11.35□□□□□ -0.59
BEST3-208ENST00000547208 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 C2CD2LO14523 706 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 TEX28O15482 410 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 KIF4AO95239 1232 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 PAPLNO95428 1278 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 URODP06132 367 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 PROZP22891 400 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 KLRC2P26717 231 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 GRIN1Q05586 938 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 DMP1Q13316 513 aaPredicted RBP11.34□□□□□ -0.59
BEST3-208ENST00000547208 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
BEST3-208ENST00000547208 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 CES5AQ6NT32 575 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 BRAPQ7Z569 592 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 CEP120Q8N960 986 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 EDAQ92838 391 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 DRC1Q96MC2 740 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 NECTIN4Q96NY8 510 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
BEST3-208ENST00000547208 PLIN2Q99541 437 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 ACO2Q99798 780 aaKnown RBP11.34□□□□□ -0.59
BEST3-208ENST00000547208 ADPGKQ9BRR6 497 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 COLEC11Q9BWP8 271 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 NT5C3AQ9H0P0 336 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 C17orf75Q9HAS0 396 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
BEST3-208ENST00000547208 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 SFI1A8K8P3 1242 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 NR1I2O75469 434 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 THP07101 528 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 PLA2G4BP0C869 781 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 IGFBP6P24592 240 aaPredicted RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 MTHFRP42898 656 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 ZXDAP98168 799 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 RAD51AP2Q09MP3 1159 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
BEST3-208ENST00000547208 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
BEST3-208ENST00000547208 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms