RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TAB3Q8N5C8 712 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 UBLCP1Q8WVY7 318 aaPredicted RBP13.69□□□□□ -0.22
SCAF11-209ENST00000547018 RFFLQ8WZ73 363 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
SCAF11-209ENST00000547018 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 CLDN3O15551 220 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 EDN1P05305 212 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
SCAF11-209ENST00000547018 PRKCIP41743 596 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 CYP24A1Q07973 514 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 ZNF516Q92618 1163 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 ALG3Q92685 438 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 C11orf70Q9BRQ4 267 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 LAMA2P24043 3122 aaKnown RBP13.68□□□□□ -0.22
SCAF11-209ENST00000547018 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 WEE2P0C1S8 567 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 TMOD1P28289 359 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 NCKAP1LP55160 1127 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 SLC10A4Q96EP9 437 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 GTPBP10A4D1E9 387 aaKnown RBP13.68□□□□□ -0.22
SCAF11-209ENST00000547018 PIK3R2O00459 728 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 ZEB2O60315 1214 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 COMTP21964 271 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 NT5DC3Q86UY8 548 aa13.68□□□□□ -0.22
SCAF11-209ENST00000547018 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
SCAF11-209ENST00000547018 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
SCAF11-209ENST00000547018 TLDC2A0PJX2 215 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 B4GALT5O43286 388 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 CYP11B1P15538 503 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 CFAP58Q5T655 872 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 FOXR2Q6PJQ5 311 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 MMP19Q99542 508 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 STRA6Q9BX79 667 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 NRBP2Q9NSY0 501 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 CNOT8Q9UFF9 292 aaKnown RBP13.67□□□□□ -0.22
SCAF11-209ENST00000547018 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 PDE4DIPQ5VU43 2346 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 FDX1P10109 184 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 CD19P15391 556 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 MUTP22033 750 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 FGFR4P22455 802 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 MCM3P25205 808 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 MMGT1Q8N4V1 131 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 ARL8AQ96BM9 186 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 HAPLN2Q9GZV7 340 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 ANAPC7Q9UJX3 599 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
SCAF11-209ENST00000547018 TCRBV7S2A1N4TA0A589 114 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 HSF2BPO75031 334 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 FARP2O94887 1054 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 EPHX2P34913 555 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 HNRNPLLQ8WVV9 542 aaKnown RBP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 CYFIP2Q96F07 1278 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 MTMR12Q9C0I1 747 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 MCM3APO60318 1980 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ANKRD62A6NC57 917 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 THAP12O43422 761 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 HOXA7P31268 230 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 PLTPP55058 493 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 GPC5P78333 572 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 CAPSQ13938 189 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ZNF564Q8TBZ8 553 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-209ENST00000547018 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ERVK-5Q9HDB9 667 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 CHRNB2P17787 502 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 FLT3P36888 993 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ALCAMQ13740 583 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 SLC9A9Q8IVB4 645 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 ANKRD13AQ8IZ07 590 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 PCYT2Q99447 389 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■■□□□ 14
SCAF11-209ENST00000547018 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SCAF11-209ENST00000547018 MAFGO15525 162 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 STBD1O95210 358 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 LYPLA2O95372 231 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 PPATQ06203 517 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 ODF2Q5BJF6 829 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 TDRD10Q5VZ19 366 aaKnown RBP13.65□□□□□ -0.22
SCAF11-209ENST00000547018 KAZNQ674X7 775 aa13.65□□□□□ -0.22
SCAF11-209ENST00000547018 ERO1BQ86YB8 467 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms