RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 REEP2Q9BRK0 252 aa16.22■□□□□ 0.19
CCDC38-205ENST00000546947 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
CCDC38-205ENST00000546947 COLEC11Q9BWP8 271 aa16.22■□□□□ 0.19
CCDC38-205ENST00000546947 CDT1Q9H211 546 aa16.22■□□□□ 0.19
CCDC38-205ENST00000546947 PTPRHQ9HD43 1115 aa16.22■□□□□ 0.19
CCDC38-205ENST00000546947 MARCH5Q9NX47 278 aa16.22■□□□□ 0.19
CCDC38-205ENST00000546947 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
CCDC38-205ENST00000546947 PRG3Q9Y2Y8 225 aaPredicted RBP16.22■□□□□ 0.19
CCDC38-205ENST00000546947 C5orf42Q9H799 3197 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-205ENST00000546947 PTGESO14684 152 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 PPP6R2O75170 966 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 FAM13AO94988 1023 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 YEATS4O95619 227 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 F13A1P00488 732 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 SOD2P04179 222 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 KRT18P05783 430 aaKnown RBP16.21■□□□□ 0.19
CCDC38-205ENST00000546947 THP07101 528 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 PROZP22891 400 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 GRM5P41594 1212 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 ZNF131P52739 623 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 TUSC3Q13454 348 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 CLUL1Q15846 466 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 ZNF568Q3ZCX4 644 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 FAM178BQ8IXR5 827 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 RNF168Q8IYW5 571 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-205ENST00000546947 TMEM87AQ8NBN3 555 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 SMRP1Q8NCR6 262 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 VN1R2Q8NFZ6 395 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 CASP10Q92851 521 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 HERC2P3Q9BVR0 1158 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 CCDC94Q9BW85 323 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-205ENST00000546947 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 PARVGQ9HBI0 331 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 SSX2IPQ9Y2D8 614 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 GDAQ9Y2T3 454 aa16.21■□□□□ 0.19
CCDC38-205ENST00000546947 SPTLC2O15270 562 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 CLASP2O75122 1294 aaKnown RBP16.2■□□□□ 0.18
CCDC38-205ENST00000546947 TOM1L1O75674 476 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 BRD1O95696 1058 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 EFEMP2O95967 443 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 MCF2P10911 925 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 ABCD1P33897 745 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
CCDC38-205ENST00000546947 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 SMAD2Q15796 467 aaKnown RBP16.2■□□□□ 0.18
CCDC38-205ENST00000546947 MPZL3Q6UWV2 235 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 ZPBP2Q6X784 338 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 CCDC73Q6ZRK6 1079 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 HAUS6Q7Z4H7 955 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 AUTS2Q8WXX7 1259 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
CCDC38-205ENST00000546947 TOPORSQ9NS56 1045 aaPredicted RBP16.2■□□□□ 0.18
CCDC38-205ENST00000546947 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
CCDC38-205ENST00000546947 ABLIM1O14639 778 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 TRAK2O60296 914 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 TBCAO75347 108 aaKnown RBP16.19■□□□□ 0.18
CCDC38-205ENST00000546947 URODP06132 367 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
CCDC38-205ENST00000546947 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 ANKRD54Q6NXT1 300 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 SPRYD3Q8NCJ5 442 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
CCDC38-205ENST00000546947 EMILIN2Q9BXX0 1053 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 MRPL17Q9NRX2 175 aaKnown RBP16.19■□□□□ 0.18
CCDC38-205ENST00000546947 TFIP11Q9UBB9 837 aaKnown RBP16.19■□□□□ 0.18
CCDC38-205ENST00000546947 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 HCFC2Q9Y5Z7 792 aa16.19■□□□□ 0.18
CCDC38-205ENST00000546947 K7ENM7 598 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
CCDC38-205ENST00000546947 RBM10P98175 930 aaKnown RBP16.18■□□□□ 0.18
CCDC38-205ENST00000546947 HSP90AA2PQ14568 343 aaPredicted RBP16.18■□□□□ 0.18
CCDC38-205ENST00000546947 NOLC1Q14978 699 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC38-205ENST00000546947 NAB2Q15742 525 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 FUT10Q6P4F1 479 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 ZBTB33Q86T24 672 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 ADHFE1Q8IWW8 467 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 CEP120Q8N960 986 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 ACAP3Q96P50 834 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 ZHX3Q9H4I2 956 aa16.18■□□□□ 0.18
CCDC38-205ENST00000546947 CASTOR2A6NHX0 329 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 CLDN3O15551 220 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 CUTAO60888 179 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 LILRB3O75022 631 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 PIGRP01833 764 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 STAT6P42226 847 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 GLUD2P49448 558 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 DSG1Q02413 1049 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 MCL1Q07820 350 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 PKP1Q13835 747 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
CCDC38-205ENST00000546947 ALKAL1Q6UXT8 129 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms