RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ZP2Q05996 745 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
SSH1-204ENST00000546697 PLIN2Q99541 437 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 RXFP1Q9HBX9 757 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 SNTG2Q9NY99 539 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 HCFC2Q9Y5Z7 792 aa16.83■□□□□ 0.28
SSH1-204ENST00000546697 SFI1A8K8P3 1242 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 PER2O15055 1255 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 SLC16A4O15374 487 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 NDUFV1P49821 464 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 GTF2BQ00403 316 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 DSG1Q02413 1049 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 MCL1Q07820 350 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 MCM6Q14566 821 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
SSH1-204ENST00000546697 KIAA0319Q5VV43 1072 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 ANKRD54Q6NXT1 300 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 SYCE2Q6PIF2 218 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 MPZL3Q6UWV2 235 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 RBM23Q86U06 439 aaKnown RBP16.82■□□□□ 0.28
SSH1-204ENST00000546697 ADHFE1Q8IWW8 467 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 SLC22A17Q8WUG5 538 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 CASP10Q92851 521 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 CLIC6Q96NY7 704 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 NECAB3Q96P71 396 aaPredicted RBP16.82■□□□□ 0.28
SSH1-204ENST00000546697 TARS2Q9BW92 718 aaKnown RBP16.82■□□□□ 0.28
SSH1-204ENST00000546697 COLEC11Q9BWP8 271 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 RHOBTB2Q9BYZ6 727 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 GBP3Q9H0R5 595 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 PARVGQ9HBI0 331 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 PARP2Q9UGN5 583 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 SSX2IPQ9Y2D8 614 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 USP20Q9Y2K6 914 aa16.82■□□□□ 0.28
SSH1-204ENST00000546697 FRMD3A2A2Y4 597 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 NR1I2O75469 434 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 CXCL14O95715 111 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 F13A1P00488 732 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSH1-204ENST00000546697 THP07101 528 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 ADRB2P07550 413 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 KCNE1P15382 129 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 CBX2Q14781 532 aaPredicted RBP16.81■□□□□ 0.28
SSH1-204ENST00000546697 HAUS6Q7Z4H7 955 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
SSH1-204ENST00000546697 RPS6KC1Q96S38 1066 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 APOL6Q9BWW8 343 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 CD320Q9NPF0 282 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 CNTN3Q9P232 1028 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
SSH1-204ENST00000546697 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
SSH1-204ENST00000546697 TRIOO75962 3097 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 SPTLC2O15270 562 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 MEFVO15553 781 aaPredicted RBP16.8■□□□□ 0.28
SSH1-204ENST00000546697 FAM189A1O60320 539 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 PPP1R37O75864 691 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 TXLNAP40222 546 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 OR1G1P47890 313 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 STRN3Q13033 797 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
SSH1-204ENST00000546697 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 AXDND1Q5T1B0 1012 aaPredicted RBP16.8■□□□□ 0.28
SSH1-204ENST00000546697 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 MAP4K3Q8IVH8 894 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 CEP120Q8N960 986 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 CXCL16Q9H2A7 254 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
SSH1-204ENST00000546697 DZANK1Q9NVP4 752 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 KLK14Q9P0G3 267 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
SSH1-204ENST00000546697 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.8■□□□□ 0.28
SSH1-204ENST00000546697 A0A087X0B3 334 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
SSH1-204ENST00000546697 TRAK2O60296 914 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
SSH1-204ENST00000546697 POU5F1Q01860 360 aaKnown RBP16.79■□□□□ 0.28
SSH1-204ENST00000546697 ITIH3Q06033 890 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 E2F4Q16254 413 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 KYAT1Q16773 422 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 SPECC1Q5M775 1068 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 FUT10Q6P4F1 479 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 GJD3Q8N144 294 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 HDAC7Q8WUI4 952 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 SNX27Q96L92 541 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 UROC1Q96N76 676 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 TSPAN18Q96SJ8 248 aa16.79■□□□□ 0.28
SSH1-204ENST00000546697 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms