RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.27
CUX1-211ENST00000546411 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
CUX1-211ENST00000546411 GGA3Q9NZ52 723 aa16.71■□□□□ 0.27
CUX1-211ENST00000546411 DIS3Q9Y2L1 958 aaKnown RBP16.71■□□□□ 0.27
CUX1-211ENST00000546411 A6NJR5 290 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 F8VZ95 297 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 ICAM1P05362 532 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 WEE2P0C1S8 567 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 TAS1R2Q8TE23 839 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 PURBQ96QR8 312 aaKnown RBP16.71■□□□□ 0.26
CUX1-211ENST00000546411 KIAA1586Q9HCI6 787 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.71■□□□□ 0.269e-8■■■■■ 27.8
CUX1-211ENST00000546411 RAB21Q9UL25 225 aa16.71■□□□□ 0.26
CUX1-211ENST00000546411 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 LSP1P33241 339 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 HSD17B3P37058 310 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 MDH1P40925 334 aaKnown RBP16.7■□□□□ 0.26
CUX1-211ENST00000546411 MSH2P43246 934 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 CCDC14Q49A88 953 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 ARHGEF18Q6ZSZ5 1173 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 C18orf8Q96DM3 657 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 EIF3HO15372 352 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■□□ 16.5
CUX1-211ENST00000546411 PRPSAP2O60256 369 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 TJP3O95049 919 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 SLC12A3P55017 1021 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 PSMC1P62191 440 aaKnown RBP16.7■□□□□ 0.26
CUX1-211ENST00000546411 XKR3Q5GH77 459 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
CUX1-211ENST00000546411 OR6B3Q8NGW1 331 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 FAM81BQ96LP2 452 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 CIITAP33076 1130 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 FAM84AQ96KN4 292 aa16.7■□□□□ 0.26
CUX1-211ENST00000546411 PFASO15067 1338 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 UBE4BO95155 1302 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 SPAG7O75391 227 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 DGKZQ13574 1117 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 KYNUQ16719 465 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 CBWD6Q4V339 395 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 RHOT1Q8IXI2 618 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 PDIK1LQ8N165 341 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 SPATA33Q96N06 139 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
CUX1-211ENST00000546411 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 FAM187AA6NFU0 413 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 NPTX2P47972 431 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 Q4G0T1 1027 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 IZUMO3Q5VZ72 239 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 SLC47A2Q86VL8 602 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 ZC3H18Q86VM9 953 aaKnown RBP16.69■□□□□ 0.26
CUX1-211ENST00000546411 KAT5Q92993 513 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 ERP44Q9BS26 406 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 DDX3XO00571 662 aaKnown RBP eCLIP16.69■□□□□ 0.26
CUX1-211ENST00000546411 RFX1P22670 979 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
CUX1-211ENST00000546411 NCOA4Q13772 614 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 FBXW10Q5XX13 1052 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 CFAP36Q96G28 342 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 CALCAP01258 141 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 NFX1Q12986 1120 aaKnown RBP16.69■□□□□ 0.26
CUX1-211ENST00000546411 FOXR1Q6PIV2 292 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 GMCL1P1Q8NEA9 526 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 ISCUQ9H1K1 167 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 ELP3Q9H9T3 547 aa16.69■□□□□ 0.26
CUX1-211ENST00000546411 SUCLA2Q9P2R7 463 aaPredicted RBP16.69■□□□□ 0.26
CUX1-211ENST00000546411 EMC2Q15006 297 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 GEN1Q17RS7 908 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 MEI1Q5TIA1 1274 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 ZBED8Q8IZ13 594 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 PITPNM3Q9BZ71 974 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 MIS12Q9H081 205 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 KCND2Q9NZV8 630 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 PPP1R9AQ9ULJ8 1098 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
CUX1-211ENST00000546411 RCN2Q14257 317 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 DUOXA2Q1HG44 320 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 SLC35G1Q2M3R5 365 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 SPOPLQ6IQ16 392 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 LRRC31Q6UY01 552 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 CENPUQ71F23 418 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 CATSPER4Q7RTX7 472 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
CUX1-211ENST00000546411 TRAF3IP3Q9Y228 551 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 MED7O43513 233 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 STAMBPO95630 424 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 MT-ND3P03897 115 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 GPC3P51654 580 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 ANKMY2Q8IV38 441 aa16.68■□□□□ 0.26
CUX1-211ENST00000546411 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
CUX1-211ENST00000546411 RGPD1P0DJD0 1748 aa16.67■□□□□ 0.26
CUX1-211ENST00000546411 RARRES1P49788 294 aa16.67■□□□□ 0.26
CUX1-211ENST00000546411 ACTR2P61160 394 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms