RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ADAM12O43184 909 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
COPS7A-221ENST00000546229 MED24O75448 989 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 KIF4AO95239 1232 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 SPATA31D3P0C874 917 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 MYBP10242 640 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
COPS7A-221ENST00000546229 SPATA31D4Q6ZUB0 917 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
COPS7A-221ENST00000546229 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.93□□□□□ -0.18
COPS7A-221ENST00000546229 KLK14Q9P0G3 267 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 WNT16Q9UBV4 365 aa13.93□□□□□ -0.18
COPS7A-221ENST00000546229 EP300Q09472 2414 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-221ENST00000546229 ZMYND10O75800 440 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
COPS7A-221ENST00000546229 SRFP11831 508 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.18
COPS7A-221ENST00000546229 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-221ENST00000546229 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 USP41Q3LFD5 358 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 PRSS55Q6UWB4 352 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-221ENST00000546229 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 CATSPER3Q86XQ3 398 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 PIK3R5Q8WYR1 880 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 WASF1Q92558 559 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 RTP3Q9BQQ7 232 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 CLSTN3Q9BQT9 956 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
COPS7A-221ENST00000546229 RECQL4O94761 1208 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 CFHP08603 1231 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 LAMP2P13473 410 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 TXKP42681 527 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 TUSC3Q13454 348 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 EEF1DP3Q658K8 133 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 LNX1Q8TBB1 728 aaPredicted RBP13.91□□□□□ -0.18
COPS7A-221ENST00000546229 RIN2Q8WYP3 895 aaPredicted RBP13.91□□□□□ -0.18
COPS7A-221ENST00000546229 STAMQ92783 540 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 POLR3CQ9BUI4 534 aaPredicted RBP13.91□□□□□ -0.18
COPS7A-221ENST00000546229 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 PRMT7Q9NVM4 692 aaPredicted RBP13.91□□□□□ -0.18
COPS7A-221ENST00000546229 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
COPS7A-221ENST00000546229 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GPR179Q6PRD1 2367 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 LRRIQ4A6NIV6 560 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 POU2F2P09086 479 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GLULP15104 373 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 HOXA9P31269 272 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 ECM1Q16610 540 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 POTEHQ6S545 545 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GET4Q7L5D6 327 aaPredicted RBP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 GPR152Q8TDT2 470 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 FGF14Q92915 247 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 RPP25Q9BUL9 199 aaKnown RBP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 TBC1D17Q9HA65 648 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 DPP7Q9UHL4 492 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 NUMBLQ9Y6R0 609 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 PDCD11Q14690 1871 aaKnown RBP13.9□□□□□ -0.18
COPS7A-221ENST00000546229 MIA3Q5JRA6 1907 aa13.9□□□□□ -0.18
COPS7A-221ENST00000546229 CASTOR2A6NHX0 329 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 MARCH6O60337 910 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 NTHL1P78549 312 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 CREMQ03060 361 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 RSPO2Q6UXX9 243 aaPredicted RBP13.89□□□□□ -0.19
COPS7A-221ENST00000546229 HACE1Q8IYU2 909 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
COPS7A-221ENST00000546229 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
COPS7A-221ENST00000546229 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
COPS7A-221ENST00000546229 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 SNTG2Q9NY99 539 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.89□□□□□ -0.19
COPS7A-221ENST00000546229 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 CA14Q9ULX7 337 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
COPS7A-221ENST00000546229 N4BP3O15049 544 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 MEFVO15553 781 aaPredicted RBP13.88□□□□□ -0.19
COPS7A-221ENST00000546229 CYP11B2P19099 503 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 FGFR3P22607 806 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 RPA1P27694 616 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms