RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 RECQL4O94761 1208 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 FGFR1OPO95684 399 aaKnown RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 CAVIN2O95810 425 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 CLTAP09496 248 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 ITGA4P13612 1032 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 ATF7P17544 494 aaPredicted RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 PMS1P54277 932 aaKnown RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 STX17P56962 302 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 ZNF445P59923 1031 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 FKBP3Q00688 224 aaKnown RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 RASIP1Q5U651 963 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 LRSAM1Q6UWE0 723 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 CEP120Q8N960 986 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 SAAL1Q96ER3 474 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 CEP63Q96MT8 703 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 SLC9A7Q96T83 725 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 APOL6Q9BWW8 343 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
PAAF1-216ENST00000546039 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
PAAF1-216ENST00000546039 RBAK-RBAKDNI3L0D1 243 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 MAPK13O15264 365 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 IBSPP21815 317 aaPredicted RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 BMP8BP34820 402 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 DEFB103AP81534 67 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 ADAM9Q13443 819 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 CSGALNACT2Q8N6G5 542 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 RNF169Q8NCN4 708 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 PHOSPHO2Q8TCD6 241 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 SNX27Q96L92 541 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 DUSP9Q99956 384 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 RPF1Q9H9Y2 349 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 RSAD1Q9HA92 442 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 SNTG2Q9NY99 539 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 CPSF3Q9UKF6 684 aaKnown RBP11.72□□□□□ -0.53
PAAF1-216ENST00000546039 HES2Q9Y543 173 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 SLC4A7Q9Y6M7 1214 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 SCN1AP35498 2009 aa11.72□□□□□ -0.53
PAAF1-216ENST00000546039 GOLGA8IPA6NC78 632 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 GOLGA8JA6NMD2 632 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 INPPL1O15357 1258 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 IL18RAPO95256 599 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CXCL8P10145 99 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 EPB41P11171 864 aaKnown RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 PSMC2P35998 433 aaKnown RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 TNFSF9P41273 254 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ACOT2P49753 483 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 OSTNP61366 133 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 MYL5Q02045 173 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 SURF1Q15526 300 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ENOX2Q16206 610 aaKnown RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 SEZ6Q53EL9 994 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ZBTB41Q5SVQ8 909 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 SPATA1Q5VX52 437 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 GLB1LQ6UWU2 654 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CD302Q8IX05 232 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ABI1Q8IZP0 508 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 ENOX1Q8TC92 643 aaKnown RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 LPPQ93052 612 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 TOP1MTQ969P6 601 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 MED15Q96RN5 788 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 RPS6KC1Q96S38 1066 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 CXXC1Q9P0U4 656 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-216ENST00000546039 PARP2Q9UGN5 583 aa11.71□□□□□ -0.53
PAAF1-216ENST00000546039 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 MEIS3P2A8K0S8 358 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 SMTNL1A8MU46 457 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 IKBKBO14920 756 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 GNA14O95837 355 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 ADRB2P07550 413 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 ATP2A2P16615 1042 aaKnown RBP11.7□□□□□ -0.54
PAAF1-216ENST00000546039 AKAP5P24588 427 aa11.7□□□□□ -0.54
PAAF1-216ENST00000546039 CASP4P49662 377 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms