RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ST3GAL5Q9UNP4 418 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 CITO14578 2027 aa8.59□□□□□ -1.03
SNHG1-223ENST00000545440 PDCD11Q14690 1871 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 DENND3A2RUS2 1198 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 TMEM150BA6NC51 233 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 C9IYK1 514 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 KHNYNO15037 678 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 MARCH6O60337 910 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 BAG4O95429 457 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 RB1P06400 928 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 EIF4BP23588 611 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 CTNNB1P35222 781 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 NLRP11P59045 1033 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 MRPS5P82675 430 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 CDC42EP1Q00587 391 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ORC2Q13416 577 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 BTG3Q14201 252 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 EPHA7Q15375 998 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 CALCRLQ16602 461 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ECM1Q16610 540 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 AAK1Q2M2I8 961 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 MTERF2Q49AM1 385 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 DNAJC14Q6Y2X3 702 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 SLC24A5Q71RS6 500 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ANO5Q75V66 913 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 TMC7Q7Z402 723 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ZNF438Q7Z4V0 828 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ZNF410Q86VK4 478 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 C4orf19Q8IY42 314 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 NEK9Q8TD19 979 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 SCLT1Q96NL6 688 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 PPP1R16BQ96T49 567 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 C11orf84Q9BUA3 381 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 LMAN2LQ9H0V9 348 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 UPF2Q9HAU5 1272 aaKnown RBP8.58□□□□□ -1.04
SNHG1-223ENST00000545440 CYP26B1Q9NR63 512 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 RGS18Q9NS28 235 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 COG5Q9UP83 839 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 MUC3AQ02505 3323 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
SNHG1-223ENST00000545440 GAS2O43903 313 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 MGEA5O60502 916 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 MAFO75444 373 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 DARSP14868 501 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 YWHABP31946 246 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 DNM2P50570 870 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 DRP2Q13474 957 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 GPM6BQ13491 265 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 DSC3Q14574 896 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 NAALADL2Q58DX5 795 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 PLA2G4FQ68DD2 849 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 NCAPH2Q6IBW4 605 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 EXOC8Q8IYI6 725 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 FAM184AQ8NB25 1140 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 FBXO18Q8NFZ0 1043 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 SLC7A3Q8WY07 619 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 P2RX5Q93086 422 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 ADAM2Q99965 735 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 ZCCHC2Q9C0B9 1178 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 FOXP1Q9H334 677 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 DHX33Q9H6R0 707 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 ELAC1Q9H777 363 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 ZSWIM4Q9H7M6 989 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 TMEM161AQ9NX61 479 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 WRAP73Q9P2S5 460 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 PCDHA12Q9UN75 941 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 PCDHB7Q9Y5E2 793 aa8.57□□□□□ -1.04
SNHG1-223ENST00000545440 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
SNHG1-223ENST00000545440 MTCL1Q9Y4B5 1905 aaKnown RBP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 LYPLA2O95372 231 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 FAM157BP0CG42 384 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 SFPQP23246 707 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 BMPR1AP36894 532 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 TRAPPC10P48553 1259 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 POLGP54098 1239 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 CYP4A11Q02928 519 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 TYRO3Q06418 890 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 EMC2Q15006 297 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 PDE12Q6L8Q7 609 aaKnown RBP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 OTUD6AQ7L8S5 288 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 GJD3Q8N144 294 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 CEP170P1Q96L14 293 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 SH2D3AQ9BRG2 576 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 GCOM2Q9BZD3 368 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 TTC12Q9H892 705 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-223ENST00000545440 DACT1Q9NYF0 836 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 RGL1Q9NZL6 768 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
SNHG1-223ENST00000545440 CDC14CA4D256 554 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 XYLBO75191 536 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 SLITRK3O94933 977 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 ZSCAN20P17040 1043 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 MCM7P33993 719 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms