RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PMLP29590 882 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 GNA11P29992 359 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 USP11P51784 963 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 PPM1LQ5SGD2 360 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 LIN9Q5TKA1 542 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 ZNF852Q6ZMS4 543 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 PRR23CQ6ZRP0 262 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 PRR23BQ6ZRT6 265 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 RNF149Q8NC42 400 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 LNX1Q8TBB1 728 aaPredicted RBP10.49□□□□□ -0.73
CHD4-212ENST00000545083 HASPINQ8TF76 798 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 JPH2Q9BR39 696 aaPredicted RBP10.49□□□□□ -0.73
CHD4-212ENST00000545083 CHRDQ9H2X0 955 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 NXF3Q9H4D5 531 aaKnown RBP10.49□□□□□ -0.73
CHD4-212ENST00000545083 DHX33Q9H6R0 707 aaKnown RBP10.49□□□□□ -0.73
CHD4-212ENST00000545083 NDRG2Q9UN36 371 aaKnown RBP10.49□□□□□ -0.73
CHD4-212ENST00000545083 IGF2RP11717 2491 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 NRG2O14511 850 aaPredicted RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 NCAM2O15394 837 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 PRPF3O43395 683 aaKnown RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 NR1I2O75469 434 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 ECI2O75521 394 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 AKAP5P24588 427 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 HOXA9P31269 272 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 PSMC5P62195 406 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 CREMQ03060 361 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 DMWDQ09019 674 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 SRSF5Q13243 272 aaKnown RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 AMHR2Q16671 573 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 SLC5A9Q2M3M2 681 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 Q4G0T1 1027 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 N4BP2L1Q5TBK1 243 aaPredicted RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 TANGO2Q6ICL3 276 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 CDR2LQ86X02 465 aaPredicted RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 RASEFQ8IZ41 740 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 CELF5Q8N6W0 485 aaKnown RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 SLC7A14Q8TBB6 771 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 ETNPPLQ8TBG4 499 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 TBCKQ8TEA7 893 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 PSPC1Q8WXF1 523 aaKnown RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 SLC7A3Q8WY07 619 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 PIK3R5Q8WYR1 880 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 MCRS1Q96EZ8 462 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 ESYT1Q9BSJ8 1104 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 CSRNP2Q9H175 543 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 ANGPTL2Q9UKU9 493 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 RAB23Q9ULC3 237 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
CHD4-212ENST00000545083 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CHD4-212ENST00000545083 SPEGQ15772 3267 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CYP3A7-CYP3A51PA0A087WV96 503 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 HRO43593 1189 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 LRP3O75074 770 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 XYLBO75191 536 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 TADA2AO75478 443 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 ERLIN2O94905 339 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 FCARP24071 287 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CYP3A7P24462 503 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 RCAN1P53805 252 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 SATB1Q01826 763 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 GRIK3Q13003 919 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 GAS6Q14393 721 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 PSMD5Q16401 504 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CSRP2Q16527 193 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 PABPC1LQ4VXU2 614 aaKnown RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 FAM171A1Q5VUB5 890 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 MAMSTRQ6ZN01 415 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 FERMT3Q86UX7 667 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CEP57Q86XR8 500 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 BICD2Q8TD16 824 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CCDC51Q96ER9 411 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 TTPALQ9BTX7 342 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 ANO2Q9NQ90 1003 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 MRPS17Q9Y2R5 130 aaKnown RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 MRPS23Q9Y3D9 190 aaKnown RBP10.47□□□□□ -0.73
CHD4-212ENST00000545083 SF3B1O75533 1304 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD4-212ENST00000545083 SDK1Q7Z5N4 2213 aa10.47□□□□□ -0.73
CHD4-212ENST00000545083 TDRD15B5MCY1 1934 aaKnown RBP10.46□□□□□ -0.73
CHD4-212ENST00000545083 CASTOR2A6NHX0 329 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 ZBTB39O15060 712 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 B4GALT5O43286 388 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 KIF4AO95239 1232 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 POU2F2P09086 479 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 CEBPBP17676 345 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 ARF4P18085 180 aaPredicted RBP10.46□□□□□ -0.73
CHD4-212ENST00000545083 IGFBP6P24592 240 aaPredicted RBP10.46□□□□□ -0.73
CHD4-212ENST00000545083 AXLP30530 894 aa10.46□□□□□ -0.73
CHD4-212ENST00000545083 HOXC13P31276 330 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms