RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 UPP2O95045 317 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
SNHG1-221ENST00000544983 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 AGMOQ6ZNB7 445 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
SNHG1-221ENST00000544983 XXYLT1Q8NBI6 393 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 RNF169Q8NCN4 708 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
SNHG1-221ENST00000544983 PARP2Q9UGN5 583 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 RWDD3Q9Y3V2 267 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 ZNF233A6NK53 670 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 MAPK13O15264 365 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 FAM189A1O60320 539 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 OFD1O75665 1012 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 RECQL4O94761 1208 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 IL18RAPO95256 599 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ADRB2P07550 413 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 BMP6P22004 513 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 CCNE1P24864 410 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
SNHG1-221ENST00000544983 NLRP12P59046 1061 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 SURF1Q15526 300 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ZCWPW2Q504Y3 356 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 XKR4Q5GH76 650 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ALKAL1Q6UXT8 129 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 USP37Q86T82 979 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 NT5DC4Q86YG4 428 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 THNSL1Q8IYQ7 743 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 LRRC43Q8N309 656 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 FBXL18Q96ME1 805 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 RPS6KC1Q96S38 1066 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 CBWD1Q9BRT8 395 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 HAPLN2Q9GZV7 340 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ASB7Q9H672 318 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
SNHG1-221ENST00000544983 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
SNHG1-221ENST00000544983 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 ANO10Q9NW15 660 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 SNTG2Q9NY99 539 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 TMEM63CQ9P1W3 806 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 CPSF3Q9UKF6 684 aaKnown RBP12.8□□□□□ -0.36
SNHG1-221ENST00000544983 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 FRMD4BQ9Y2L6 1034 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 HES2Q9Y543 173 aa12.8□□□□□ -0.36
SNHG1-221ENST00000544983 TMEM265A0A087WTH1 108 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 FGFR1OPO95684 399 aaKnown RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 NR3C1P04150 777 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 FGFR1P11362 822 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 HARSP12081 509 aaKnown RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 KCNE1P15382 129 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 AKAP5P24588 427 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 PPP2R3AQ06190 1150 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 ENPEPQ07075 957 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 GRIK3Q13003 919 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 PAK1Q13153 545 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 BTG3Q14201 252 aaPredicted RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 CLLU1OSQ5K130 101 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 SMYD4Q8IYR2 804 aaPredicted RBP12.79□□□□□ -0.36
SNHG1-221ENST00000544983 FIBCD1Q8N539 461 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 LPPQ93052 612 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 P2RX5Q93086 422 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 SNX27Q96L92 541 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 SAMD11Q96NU1 681 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 CASD1Q96PB1 797 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 AAASQ9NRG9 546 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 RWDD2AQ9UIY3 292 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 DERAQ9Y315 318 aa12.79□□□□□ -0.36
SNHG1-221ENST00000544983 CITO14578 2027 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 TBKBP1A7MCY6 615 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 TISP43B9A030 160 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 CETN3O15182 167 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 EXOC3O60645 756 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 THP07101 528 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 NR2F2P24468 414 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 MLH1P40692 756 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
SNHG1-221ENST00000544983 ENOX2Q16206 610 aaKnown RBP12.78□□□□□ -0.36
SNHG1-221ENST00000544983 STX1AQ16623 288 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 SLC10A6Q3KNW5 377 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 BRSK2Q8IWQ3 736 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 CEP120Q8N960 986 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 HELQQ8TDG4 1101 aa12.78□□□□□ -0.36
SNHG1-221ENST00000544983 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms