RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
ACTN1-206ENST00000544964 GOLPH3LQ9H4A5 285 aa13.76□□□□□ -0.21
ACTN1-206ENST00000544964 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
ACTN1-206ENST00000544964 RIF1Q5UIP0 2472 aaKnown RBP13.76□□□□□ -0.21
ACTN1-206ENST00000544964 DMDP11532 3685 aa13.76□□□□□ -0.21
ACTN1-206ENST00000544964 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
ACTN1-206ENST00000544964 LILRB3O75022 631 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 EFEMP2O95967 443 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 PFKFB1P16118 471 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 MTHFRP42898 656 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 CLCN4P51793 760 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 PTENP60484 403 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 CAPSQ13938 189 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 GIT2Q14161 759 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 MCM6Q14566 821 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-206ENST00000544964 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 ASAP3Q8TDY4 903 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 RAD54LQ92698 747 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 DHX58Q96C10 678 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 IPPQ9Y573 584 aa13.75□□□□□ -0.21
ACTN1-206ENST00000544964 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 ASAP2O43150 1006 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 ERLIN2O94905 339 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 POMCP01189 267 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 ASGR2P07307 311 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 MLH1P40692 756 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 STAT6P42226 847 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 NDUFA8P51970 172 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 PTPN5P54829 565 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 DSC1Q08554 894 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
ACTN1-206ENST00000544964 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 KLHL5Q96PQ7 755 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 KCNH3Q9ULD8 1083 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 HES2Q9Y543 173 aa13.74□□□□□ -0.21
ACTN1-206ENST00000544964 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 SPTBN4Q9H254 2564 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 F8W810 466 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 NRP1O14786 923 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 DGAT1O75907 488 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 GLRA2P23416 452 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 ARL2P36404 184 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-206ENST00000544964 PCBP1Q15365 356 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTN1-206ENST00000544964 E2F4Q16254 413 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 RINT1Q6NUQ1 792 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 KCTD17Q8N5Z5 321 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
ACTN1-206ENST00000544964 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 GAD1Q99259 594 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 RUSC1Q9BVN2 902 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
ACTN1-206ENST00000544964 SFXN1Q9H9B4 322 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 KANSL3Q9P2N6 904 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 STK17AQ9UEE5 414 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 USTQ9Y2C2 406 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-206ENST00000544964 GVINP1Q7Z2Y8 2422 aa13.73□□□□□ -0.21
ACTN1-206ENST00000544964 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 FAM237AA0A1B0GTK4 181 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 B4GALT5O43286 388 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 SOD2P04179 222 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 ITGA4P13612 1032 aa13.72□□□□□ -0.21
ACTN1-206ENST00000544964 ARF4P18085 180 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-206ENST00000544964 AVPR2P30518 371 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms