RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	STAT6	P42226	847 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	CACNB1	Q02641	598 aa	Predicted RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	CLUL1	Q15846	466 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	ATL3	Q6DD88	541 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	MPZL3	Q6UWV2	235 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	SPRYD3	Q8NCJ5	442 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	LINC00301	Q8NCQ3	95 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	TMEM161B	Q8NDZ6	487 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	CASP10	Q92851	521 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	CLIC6	Q96NY7	704 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	POP1	Q99575	1024 aa	Known RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	TARS2	Q9BW92	718 aa	Known RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	EMILIN2	Q9BXX0	1053 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	MRPL17	Q9NRX2	175 aa	Known RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	USP20	Q9Y2K6	914 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382		K7ENM7	598 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	B4GALT3	O60512	393 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	TOM1L1	O75674	476 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	SOD2	P04179	222 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	EDN1	P05305	212 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	GRM5	P41594	1212 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	MATR3	P43243	847 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	NCKAP1L	P55160	1127 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	DLX2	Q07687	328 aa	Predicted RBP	13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	COASY	Q13057	564 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	TUSC3	Q13454	348 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	TPRN	Q4KMQ1	711 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	KIAA1841	Q6NSI8	718 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	LLGL2	Q6P1M3	1020 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	ZPBP2	Q6X784	338 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	SV2B	Q7L1I2	683 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	ZBTB33	Q86T24	672 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	PPFIBP1	Q86W92	1011 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	FAM178B	Q8IXR5	827 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	KCNG4	Q8TDN1	519 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	HERC2P3	Q9BVR0	1158 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	CDT1	Q9H211	546 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	MIOS	Q9NXC5	875 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	ANKFY1	Q9P2R3	1169 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	PRKAG3	Q9UGI9	489 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	CFAP45	Q9UL16	551 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	IRAK3	Q9Y616	596 aa		13.85	□□□□□ -0.19
CLPB-213	ENST00000544382	CLDN3	O15551	220 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	MBTPS2	O43462	519 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	TRAK2	O60296	914 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	TADA2A	O75478	443 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	GLP2R	O95838	553 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	HARS	P12081	509 aa	Known RBP	13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	IL9	P15248	144 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	HOXB8	P17481	243 aa	Predicted RBP	13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	LIG4	P49917	911 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	ZNF131	P52739	623 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	BECN1	Q14457	450 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	KYAT1	Q16773	422 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	ELMSAN1	Q6PJG2	1045 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	TMEM184A	Q6ZMB5	413 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	USP49	Q70CQ1	688 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	TAS1R3	Q7RTX0	852 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	HAUS6	Q7Z4H7	955 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	SMRP1	Q8NCR6	262 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	GSTCD	Q8NEC7	633 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	KCNN1	Q92952	543 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	MSLNL	Q96KJ4	702 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	ACAP3	Q96P50	834 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	NECAB3	Q96P71	396 aa	Predicted RBP	13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	PTPRH	Q9HD43	1115 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	SLC38A7	Q9NVC3	462 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	DZANK1	Q9NVP4	752 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	MARCH5	Q9NX47	278 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	CLEC1B	Q9P126	229 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	TFIP11	Q9UBB9	837 aa	Known RBP	13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	SEL1L	Q9UBV2	794 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	ADAM28	Q9UKQ2	775 aa		13.84	□□□□□ -0.19
CLPB-213	ENST00000544382	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	4e-6	■■■■■ 100.3
CLPB-213	ENST00000544382	SPDYE4	A6NLX3	237 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	HNRNPDL	O14979	420 aa	Known RBP	13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	CUTA	O60888	179 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	CLASP2	O75122	1294 aa	Known RBP	13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	BRD1	O95696	1058 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	GAP43	P17677	238 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	PROZ	P22891	400 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	SSTR3	P32745	418 aa	Predicted RBP	13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	GLUD2	P49448	558 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	CREM	Q03060	361 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	PTPN14	Q15678	1187 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	SMAD2	Q15796	467 aa	Known RBP	13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	ANKRD54	Q6NXT1	300 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	FUT10	Q6P4F1	479 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	LRRC15	Q8TF66	581 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	AUTS2	Q8WXX7	1259 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	UROC1	Q96N76	676 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	LRRC27	Q9C0I9	530 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	TBX20	Q9UMR3	447 aa		13.83	□□□□□ -0.2
CLPB-213	ENST00000544382	HCFC2	Q9Y5Z7	792 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms