RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZNF408Q9H9D4 720 aa18.39■□□□□ 0.53
PTPRO-209ENST00000543886 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
PTPRO-209ENST00000543886 AMFRQ9UKV5 643 aa18.39■□□□□ 0.53
PTPRO-209ENST00000543886 ASB14A6NK59 587 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 GAS2O43903 313 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 BUB1BO60566 1050 aaPredicted RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 FTLP02792 175 aaPredicted RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CYP2C8P10632 490 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CLDN10P78369 228 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 IER5Q5VY09 327 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 NT5DC3Q86UY8 548 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 SLC47A2Q86VL8 602 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 TRIM50Q86XT4 487 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 RHOT2Q8IXI1 618 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ATP8B4Q8TF62 1192 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 PRPF31Q8WWY3 499 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ARHGEF26Q96DR7 871 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ISCUQ9H1K1 167 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ST7Q9NRC1 585 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 FAM170AA1A519 330 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CEP104O60308 925 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 RTN2O75298 545 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 TXNP10599 105 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 PIK3CAP42336 1068 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 EFNA5P52803 228 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 RNASE9P60153 205 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CCNA1P78396 465 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 GCNT1Q02742 428 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 WDR44Q5JSH3 913 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CCNI2Q6ZMN8 369 aaPredicted RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 C15orf39Q6ZRI6 1047 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 USP38Q8NB14 1042 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 MORC4Q8TE76 937 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ZBTB45Q96K62 511 aaPredicted RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 CALR3Q96L12 384 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 PI4K2AQ9BTU6 479 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ACBD3Q9H3P7 528 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 STIM2Q9P246 746 aa18.38■□□□□ 0.53
PTPRO-209ENST00000543886 ZNFX1Q9P2E3 1918 aaKnown RBP18.38■□□□□ 0.53
PTPRO-209ENST00000543886 MCM3APO60318 1980 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 A0A0B4J269 797 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 CYP11B1P15538 503 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 CHRNB2P17787 502 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 FAM193AP78312 1265 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 DRP2Q13474 957 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 BIRC3Q13489 604 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
PTPRO-209ENST00000543886 CCDC62Q6P9F0 684 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
PTPRO-209ENST00000543886 GPRC5AQ8NFJ5 357 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 TATDN2Q93075 761 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 UBXN6Q9BZV1 441 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 HAPLN2Q9GZV7 340 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 EFCC1Q9HA90 598 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 GZMAP12544 262 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 KRT5P13647 590 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 TNNC1P63316 161 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 GPC5P78333 572 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 SLC7A5Q01650 507 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 MXD4Q14582 209 aaPredicted RBP18.37■□□□□ 0.53
PTPRO-209ENST00000543886 GPR162Q16538 588 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 ZACNQ401N2 412 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 CRELD2Q6UXH1 353 aaPredicted RBP18.37■□□□□ 0.53
PTPRO-209ENST00000543886 METTL13Q8N6R0 699 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 ACTRT1Q8TDG2 376 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 CTTNBP2NLQ9P2B4 639 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 DMGDHQ9UI17 866 aaKnown RBP18.37■□□□□ 0.53
PTPRO-209ENST00000543886 TRPC6Q9Y210 931 aa18.37■□□□□ 0.53
PTPRO-209ENST00000543886 PGRMC1O00264 195 aaKnown RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 MMEP08473 750 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 OAS2P29728 719 aaKnown RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 SLC26A2P50443 739 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 CDR2Q01850 454 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 PLCB4Q15147 1175 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 ZPBP2Q6X784 338 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 ZBTB8OSQ8IWT0 167 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 GSPT2Q8IYD1 628 aaKnown RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 SCFD2Q8WU76 684 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 DHX38Q92620 1227 aaKnown RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 COPS5Q92905 334 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 HES6Q96HZ4 224 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 JPH2Q9BR39 696 aaPredicted RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 MRPL4Q9BYD3 311 aaKnown RBP18.36■□□□□ 0.53
PTPRO-209ENST00000543886 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
PTPRO-209ENST00000543886 CLDN3O15551 220 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 HLA-DRAP01903 254 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 C4BPAP04003 597 aaKnown RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 EDN1P05305 212 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 CETPP11597 493 aa18.35■□□□□ 0.53
PTPRO-209ENST00000543886 HARSP12081 509 aaKnown RBP18.35■□□□□ 0.53
PTPRO-209ENST00000543886 HADHBP55084 474 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms