RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
VTN-203ENST00000542029 PCDHB6Q9Y5E3 794 aa12.56□□□□□ -0.4
VTN-203ENST00000542029 SF3B1O75533 1304 aaKnown RBP eCLIP12.56□□□□□ -0.4
VTN-203ENST00000542029 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 WDR81Q562E7 1941 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 TECTAO75443 2155 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 H3BQV1 296 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 K7ERI5 159 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 RECQL4O94761 1208 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 SP100P23497 879 aaPredicted RBP12.55□□□□□ -0.4
VTN-203ENST00000542029 NUBP1P53384 320 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
VTN-203ENST00000542029 NBR1Q14596 966 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 MCTP1Q6DN14 999 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 DRC1Q96MC2 740 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.55□□□□□ -0.4
VTN-203ENST00000542029 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 KLK14Q9P0G3 267 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 ZDBF2Q9HCK1 2354 aa12.55□□□□□ -0.4
VTN-203ENST00000542029 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 LIG1P18858 919 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 ECM1Q16610 540 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
VTN-203ENST00000542029 TAS1R1Q7RTX1 841 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
VTN-203ENST00000542029 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 GPR62Q9BZJ7 368 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 TOPORSQ9NS56 1045 aaPredicted RBP12.54□□□□□ -0.4
VTN-203ENST00000542029 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 CDH22Q9UJ99 828 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 TNFSF13BQ9Y275 285 aa12.54□□□□□ -0.4
VTN-203ENST00000542029 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.54□□□□□ -0.4
VTN-203ENST00000542029 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 SLC26A4O43511 780 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 PAPLNO95428 1278 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 BMP15O95972 392 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 NPTX2P47972 431 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 YARSP54577 528 aaKnown RBP12.53□□□□□ -0.4
VTN-203ENST00000542029 PTPN5P54829 565 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
VTN-203ENST00000542029 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 UROC1Q96N76 676 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 TTPALQ9BTX7 342 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
VTN-203ENST00000542029 MRPL4Q9BYD3 311 aaKnown RBP12.53□□□□□ -0.4
VTN-203ENST00000542029 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
VTN-203ENST00000542029 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 IGSF9Q9P2J2 1179 aa12.53□□□□□ -0.4
VTN-203ENST00000542029 CCDC195A0A1B0GUA6 201 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 E9PMD0 336 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 PTGESO14684 152 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 HIP1RO75146 1068 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 GUCY2CP25092 1073 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 GJB2P29033 226 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 SMTNP53814 917 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 PEX3P56589 373 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 NHLH1Q02575 133 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 HYIQ5T013 277 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 FAM171A1Q5VUB5 890 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 EEF1DP3Q658K8 133 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 RINT1Q6NUQ1 792 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 KANK3Q6NY19 840 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 DCLRE1AQ6PJP8 1040 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 C1orf186Q6ZWK4 172 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
VTN-203ENST00000542029 NXPE3Q969Y0 559 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
VTN-203ENST00000542029 CDK5RAP3Q96JB5 506 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 AK8Q96MA6 479 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 NTPCRQ9BSD7 190 aaKnown RBP12.52□□□□□ -0.41
VTN-203ENST00000542029 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 PIDD1Q9HB75 910 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 KMT5AQ9NQR1 393 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 GDAQ9Y2T3 454 aa12.52□□□□□ -0.41
VTN-203ENST00000542029 F8W810 466 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 H0YCG3 227 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 TGM5O43548 720 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 BRD1O95696 1058 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 ASGR2P07307 311 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 SCP2P22307 547 aa12.51□□□□□ -0.41
VTN-203ENST00000542029 AVPR2P30518 371 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms