RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 C7orf61Q8IZ16 206 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 CSGALNACT2Q8N6G5 542 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 CEP120Q8N960 986 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 RDH13Q8NBN7 331 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 NOC3LQ8WTT2 800 aaKnown RBP10.2□□□□□ -0.78
DDX55-208ENST00000541259 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 TCHPQ9BT92 498 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 EIF2AQ9BY44 585 aaKnown RBP10.2□□□□□ -0.78
DDX55-208ENST00000541259 CDT1Q9H211 546 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 SQORQ9Y6N5 450 aa10.2□□□□□ -0.78
DDX55-208ENST00000541259 TTC3P53804 2025 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 TDRD15B5MCY1 1934 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 PTPRSQ13332 1948 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 A0A0B4J269 797 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 BECN2A8MW95 431 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 N4BP3O15049 544 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 FAM189A1O60320 539 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 AKAP3O75969 853 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 AXLP30530 894 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 TNFSF9P41273 254 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 ACOT2P49753 483 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 OSTNP61366 133 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 SNRPFP62306 86 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 FKBP3Q00688 224 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 MCL1Q07820 350 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 DSC3Q14574 896 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 NOLC1Q14978 699 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDX55-208ENST00000541259 PCBP1Q15365 356 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDX55-208ENST00000541259 ZNF568Q3ZCX4 644 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 PLEKHG4Q58EX7 1191 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 SLFN12LQ6IEE8 588 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 NOTUMQ6P988 496 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 FOXR2Q6PJQ5 311 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 CRELD2Q6UXH1 353 aaPredicted RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 CBWD2Q8IUF1 395 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 SLC9A9Q8IVB4 645 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 THNSL1Q8IYQ7 743 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 USP38Q8NB14 1042 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 DBF4BQ8NFT6 615 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 MSTO1Q9BUK6 570 aa10.19□□□□□ -0.78
DDX55-208ENST00000541259 IFIH1Q9BYX4 1025 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 CGNQ9P2M7 1197 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 AGO2Q9UKV8 859 aaKnown RBP10.19□□□□□ -0.78
DDX55-208ENST00000541259 CETN3O15182 167 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 MEFVO15553 781 aaPredicted RBP10.18□□□□□ -0.78
DDX55-208ENST00000541259 EXOC3O60645 756 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CXCL10P02778 98 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 ADRB2P07550 413 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 MCF2P10911 925 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 ATP1A3P13637 1013 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CSF2RAP15509 400 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 RAG1P15918 1043 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 SYN1P17600 705 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 RPL13P26373 211 aaKnown RBP10.18□□□□□ -0.78
DDX55-208ENST00000541259 NCBP1Q09161 790 aaKnown RBP10.18□□□□□ -0.78
DDX55-208ENST00000541259 MYBPC2Q14324 1141 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CDKAL1Q5VV42 579 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 TWF2Q6IBS0 349 aaKnown RBP10.18□□□□□ -0.78
DDX55-208ENST00000541259 SLC27A1Q6PCB7 646 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 FILIP1Q7Z7B0 1213 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CREBRFQ8IUR6 639 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 XXYLT1Q8NBI6 393 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 TMEM174Q8WUU8 243 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 LINC01599Q8WXQ3 324 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 DPF3Q92784 378 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CEP63Q96MT8 703 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 ADAM2Q99965 735 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 FAM213AQ9BRX8 229 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CXCL16Q9H2A7 254 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 THAP9Q9H5L6 903 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CHST12Q9NRB3 414 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 HES2Q9Y543 173 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 CEP290O15078 2479 aa10.18□□□□□ -0.78
DDX55-208ENST00000541259 FNDC1Q4ZHG4 1894 aaPredicted RBP10.17□□□□□ -0.78
DDX55-208ENST00000541259 ENPP3O14638 875 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 OGTO15294 1046 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 EXTL3O43909 919 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 ACRP10323 421 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 ZNF18P17022 549 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 ZSCAN20P17040 1043 aaPredicted RBP10.17□□□□□ -0.78
DDX55-208ENST00000541259 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
DDX55-208ENST00000541259 FECHP22830 423 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 WNT7BP56706 349 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 PRSS12P56730 875 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 SNRNP35Q16560 246 aaKnown RBP10.17□□□□□ -0.78
DDX55-208ENST00000541259 MFSD5Q6N075 450 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 FAM186BQ8IYM0 893 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 SMG8Q8ND04 991 aaKnown RBP10.17□□□□□ -0.78
DDX55-208ENST00000541259 PLEKHO2Q8TD55 490 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 BADQ92934 168 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 BORCS6Q96GS4 357 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 FAM84AQ96KN4 292 aa10.17□□□□□ -0.78
DDX55-208ENST00000541259 CNOT6LQ96LI5 555 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms