RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 SLC16A4O15374 487 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 STX6O43752 255 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 EDN1P05305 212 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 TUSC3Q13454 348 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 DHX8Q14562 1220 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 CBX2Q14781 532 aaPredicted RBP18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 KIAA1841Q6NSI8 718 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 CES5AQ6NT32 575 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 ACO2Q99798 780 aaKnown RBP18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 TCHPQ9BT92 498 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 PHF7Q9BWX1 381 aaPredicted RBP18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 DZANK1Q9NVP4 752 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 CLIC4Q9Y696 253 aa18.84■□□□□ 0.61
CACNA2D4-211ENST00000540728 SPDYE4A6NLX3 237 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 PLCG1P19174 1290 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 SP100P23497 879 aaPredicted RBP18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 KLRC2P26717 231 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 MARCKSP29966 332 aaPredicted RBP18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 GLUD2P49448 558 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 YARSP54577 528 aaKnown RBP18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 ZNF568Q3ZCX4 644 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 SYCE2Q6PIF2 218 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 GPBP1Q86WP2 473 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 CCSER1Q9C0I3 900 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 CCDC39Q9UFE4 941 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 ADAM28Q9UKQ2 775 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 ODF2LQ9ULJ1 636 aa18.83■□□□□ 0.6
CACNA2D4-211ENST00000540728 PRR33A8MZF0 331 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 C2CD2LO14523 706 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 TADA2AO75478 443 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 TXLNAP40222 546 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 CEBPZQ03701 1054 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 GRIN1Q05586 938 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 ITIH3Q06033 890 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 HSP90AA2PQ14568 343 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 KARSQ15046 597 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 PTPAQ15257 358 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 SUSD6Q92537 303 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 KLHL5Q96PQ7 755 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 TARS2Q9BW92 718 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 S1PR5Q9H228 398 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 TOPORSQ9NS56 1045 aaPredicted RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 SRPRBQ9Y5M8 271 aaKnown RBP18.82■□□□□ 0.6
CACNA2D4-211ENST00000540728 NPHP3-ACAD11A0A0J9YXS1 232 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 PTGESO14684 152 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 FAM13AO94988 1023 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 PDIA4P13667 645 aaKnown RBP18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 MCM6Q14566 821 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 USP41Q3LFD5 358 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 ARSHQ5FYA8 562 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 FUT10Q6P4F1 479 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 ELMSAN1Q6PJG2 1045 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 TAS1R3Q7RTX0 852 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 ZBTB33Q86T24 672 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 TMEM161BQ8NDZ6 487 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 LARP4BQ92615 738 aaKnown RBP18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 RAD54LQ92698 747 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 CDT1Q9H211 546 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 CDH22Q9UJ99 828 aa18.81■□□□□ 0.6
CACNA2D4-211ENST00000540728 CASTOR2A6NHX0 329 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 LOC730098B7Z3J9 87 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 LILRB3O75022 631 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 TBCAO75347 108 aaKnown RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 ADH1AP07327 375 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 CNPP09543 421 aaKnown RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 MCF2P10911 925 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 EPCAMP16422 314 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 SCP2P22307 547 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 GRM5P41594 1212 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 MPZL3Q6UWV2 235 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 TAS1R1Q7RTX1 841 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 RNF168Q8IYW5 571 aaPredicted RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 MYCT1Q8N699 235 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 SLC22A17Q8WUG5 538 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 RIPOR3Q96MK2 946 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 NECTIN4Q96NY8 510 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 REEP2Q9BRK0 252 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 ADAM7Q9H2U9 754 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 PTPRHQ9HD43 1115 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 BLOC1S4Q9NUP1 217 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 DPP7Q9UHL4 492 aa18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 FBXO2Q9UK22 296 aaPredicted RBP18.8■□□□□ 0.6
CACNA2D4-211ENST00000540728 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 F8W810 466 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 TOM1L1O75674 476 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 EFEMP2O95967 443 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 MAPTP10636 758 aaKnown RBP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 DDIT3P35638 169 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 MTHFRP42898 656 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms